Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447602

Identifier: 46447602

GI number: 46447602

Start: 2346419

End: 2347696

Strand: Direct

Name: 46447602

Synonym: pc1968

Alternate gene names: NA

Gene position: 2346419-2347696 (Clockwise)

Preceding gene: 46447601

Following gene: 46447603

Centisome position: 97.18

GC content: 35.52

Gene sequence:

>1278_bases
ATGCTTATAAAACAAATTAGGGGAGGCTTAATGTTTGGTGGAAAATCAAATACCACGCTTGATACTAGACCTAGATATGA
AAGTTCGGATATTAACTCACATTATCCAAATTCAGATGCTGAAGAACGAGAGCTTTGTATAAAAAATTTTTTTGCCATAC
TGGATATGGGTCTGCAGACATTGCAGACATCGCAGACAAATCCGCCTGGTTTAAATAGTAAGAAAAAAATTGATTTGATA
AGTCAAAAAGTCTCAACGAATGACGAAAGTTCTATTCCTAGCTCTGATGATGAAAGTTCTGGCTCCAGCTTTGATTCTGA
GAAAGAACTTTATTTGATTAGCGATCGTATGAACTTTACCGATCGGCATAAATTTTCGCTAGAGACTAAAATAGTGAATG
TCGAACTTATTTCTTCTACTGTTCAAATTTACTTGGAAGAAAACATACAGACATACAAAGATTTTAAACTTAAAAATTTT
TCTAATCGTAAAATTTTAATTCTTATTCATGGATTCACAGTGAAATATGAGAATGCATCGAAAACACTACGACACCTTGC
CGATAAAGTTGGGGATAGATATGACGCTGTTATTGGTTATTTATATCCTGCTTGCGCAAAATTTTACCAATATAATCAAG
CAAAAGAGAATGGATTGTACGTAGCTGAAAAGCGGCTACCGGAGATATTGCATTCAATACAATCAGTAGCGGAACGTGTA
GACATTGTAGCTCATAGCATGGGAACAATAGTTGCCATGCACGCATTAAATCAAAGCGCCAGTCCAAAAATTGATAAACT
CTTCCTTCTTGGAGGAGTACTTGAAGAAAAAAGTATTTTTGAATGTGATGGTCAAGGATGTACTACTTTGAAGCGGGCAT
TATCTAATGCTAAAAACATCTATGTGCTTTATTCCTGTAATGATAAAGTCCTGCCATGGCTGCATGTTATCGATTCTACG
CAACCTCTTGGACGTCTCAGTAAAAATATACAGCAAAAACCTATCGCAAGAAATGTTTGCCTAATTAATACTTCTTCCGT
TGTGAAAGGCCATAGTGCTTATTTTCAAAGTCAAGAGATCTTTAAATTTATATACGATGATGCACAAGGTAACAACAGCC
TAGAGGGTACTTCTTTCTCTCTTACTTTCGATGGATTATCCTCTTCGGAGCATCCTATAGTCTGTCCTAAAGGGAAAAGT
AATGCCATTTCGAGAGGATTTTCTAAAAAATTTGTTGCCTTTAAATTCCGAGGAAAAAAAGCACTTTCCAAAGATTAA

Upstream 100 bases:

>100_bases
TTATTTAATATAATAATTTTATTAAATTTTAATTATACAATTCATTAAAATAGATTTAAAATATTAAGTTAATATTTAAA
ATTTATTAGGTTTTATATAA

Downstream 100 bases:

>100_bases
CACATAAAAGTAAGCTCTAAAATCAAGGCCAAATTCCAGCCAAATGGGTATTTTTGACCTTCATTTTAGAGCCAATTAAC
TTATCCTATGCACAAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MLIKQIRGGLMFGGKSNTTLDTRPRYESSDINSHYPNSDAEERELCIKNFFAILDMGLQTLQTSQTNPPGLNSKKKIDLI
SQKVSTNDESSIPSSDDESSGSSFDSEKELYLISDRMNFTDRHKFSLETKIVNVELISSTVQIYLEENIQTYKDFKLKNF
SNRKILILIHGFTVKYENASKTLRHLADKVGDRYDAVIGYLYPACAKFYQYNQAKENGLYVAEKRLPEILHSIQSVAERV
DIVAHSMGTIVAMHALNQSASPKIDKLFLLGGVLEEKSIFECDGQGCTTLKRALSNAKNIYVLYSCNDKVLPWLHVIDST
QPLGRLSKNIQQKPIARNVCLINTSSVVKGHSAYFQSQEIFKFIYDDAQGNNSLEGTSFSLTFDGLSSSEHPIVCPKGKS
NAISRGFSKKFVAFKFRGKKALSKD

Sequences:

>Translated_425_residues
MLIKQIRGGLMFGGKSNTTLDTRPRYESSDINSHYPNSDAEERELCIKNFFAILDMGLQTLQTSQTNPPGLNSKKKIDLI
SQKVSTNDESSIPSSDDESSGSSFDSEKELYLISDRMNFTDRHKFSLETKIVNVELISSTVQIYLEENIQTYKDFKLKNF
SNRKILILIHGFTVKYENASKTLRHLADKVGDRYDAVIGYLYPACAKFYQYNQAKENGLYVAEKRLPEILHSIQSVAERV
DIVAHSMGTIVAMHALNQSASPKIDKLFLLGGVLEEKSIFECDGQGCTTLKRALSNAKNIYVLYSCNDKVLPWLHVIDST
QPLGRLSKNIQQKPIARNVCLINTSSVVKGHSAYFQSQEIFKFIYDDAQGNNSLEGTSFSLTFDGLSSSEHPIVCPKGKS
NAISRGFSKKFVAFKFRGKKALSKD
>Mature_425_residues
MLIKQIRGGLMFGGKSNTTLDTRPRYESSDINSHYPNSDAEERELCIKNFFAILDMGLQTLQTSQTNPPGLNSKKKIDLI
SQKVSTNDESSIPSSDDESSGSSFDSEKELYLISDRMNFTDRHKFSLETKIVNVELISSTVQIYLEENIQTYKDFKLKNF
SNRKILILIHGFTVKYENASKTLRHLADKVGDRYDAVIGYLYPACAKFYQYNQAKENGLYVAEKRLPEILHSIQSVAERV
DIVAHSMGTIVAMHALNQSASPKIDKLFLLGGVLEEKSIFECDGQGCTTLKRALSNAKNIYVLYSCNDKVLPWLHVIDST
QPLGRLSKNIQQKPIARNVCLINTSSVVKGHSAYFQSQEIFKFIYDDAQGNNSLEGTSFSLTFDGLSSSEHPIVCPKGKS
NAISRGFSKKFVAFKFRGKKALSKD

Specific function: Unknown

COG id: COG4782

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47674; Mature: 47674

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKQIRGGLMFGGKSNTTLDTRPRYESSDINSHYPNSDAEERELCIKNFFAILDMGLQT
CCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQTSQTNPPGLNSKKKIDLISQKVSTNDESSIPSSDDESSGSSFDSEKELYLISDRMNFT
HHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
DRHKFSLETKIVNVELISSTVQIYLEENIQTYKDFKLKNFSNRKILILIHGFTVKYENAS
CCCEEEEEEEEEEEEEHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEEEEEEEECCHH
KTLRHLADKVGDRYDAVIGYLYPACAKFYQYNQAKENGLYVAEKRLPEILHSIQSVAERV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
DIVAHSMGTIVAMHALNQSASPKIDKLFLLGGVLEEKSIFECDGQGCTTLKRALSNAKNI
HHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHCHHCCCCEEEECCCCHHHHHHHHCCCCCE
YVLYSCNDKVLPWLHVIDSTQPLGRLSKNIQQKPIARNVCLINTSSVVKGHSAYFQSQEI
EEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHH
FKFIYDDAQGNNSLEGTSFSLTFDGLSSSEHPIVCPKGKSNAISRGFSKKFVAFKFRGKK
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCHHHHCCCCCCEEEEEECCCC
ALSKD
CCCCC
>Mature Secondary Structure
MLIKQIRGGLMFGGKSNTTLDTRPRYESSDINSHYPNSDAEERELCIKNFFAILDMGLQT
CCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQTSQTNPPGLNSKKKIDLISQKVSTNDESSIPSSDDESSGSSFDSEKELYLISDRMNFT
HHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
DRHKFSLETKIVNVELISSTVQIYLEENIQTYKDFKLKNFSNRKILILIHGFTVKYENAS
CCCEEEEEEEEEEEEEHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEEEEEEEECCHH
KTLRHLADKVGDRYDAVIGYLYPACAKFYQYNQAKENGLYVAEKRLPEILHSIQSVAERV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
DIVAHSMGTIVAMHALNQSASPKIDKLFLLGGVLEEKSIFECDGQGCTTLKRALSNAKNI
HHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHCHHCCCCEEEECCCCHHHHHHHHCCCCCE
YVLYSCNDKVLPWLHVIDSTQPLGRLSKNIQQKPIARNVCLINTSSVVKGHSAYFQSQEI
EEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHH
FKFIYDDAQGNNSLEGTSFSLTFDGLSSSEHPIVCPKGKSNAISRGFSKKFVAFKFRGKK
HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCHHHHCCCCCCEEEEEECCCC
ALSKD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA