| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447586
Identifier: 46447586
GI number: 46447586
Start: 2319305
End: 2320414
Strand: Direct
Name: 46447586
Synonym: pc1952
Alternate gene names: NA
Gene position: 2319305-2320414 (Clockwise)
Preceding gene: 46447585
Following gene: 46447591
Centisome position: 96.06
GC content: 34.86
Gene sequence:
>1110_bases ATGCAAGTGTATCCAACAACATCTGTTTCTTCAGAAATTCATTATCATGTCCAAGAACAAAGTTTGAAGCATAAATTATC TTCAACCGCTGAAAAAATTATACAACTTAATCCAAGTCTACTCTTAGGTGAGTCTAATTTATTCAACTATGATTCGACAA ACCACGCCATTGTGTTAGCACCCCAGTTTCAGAGTCTCTTAACATTACTCGTTCAGCTAGATGAGTTAGATTGTAAAGCT TTAACAGCAAATTGCTTGTATGATCTGAATTCAATTCTCCAGCAATCTCAAGGTATTCGAGGAGGCTTATTGCGTAAAGA AGGAACAGAAAGATGGCATTTAGAAGATAATCTTACTAAGCAAAAATACAGCCAAACTTTCAATGTATTATTACAGCAAT TAGGTTTCGTTTTTCCAAAATCTATTGATAGTGAAATGACCGTTGATCACTGTATTGTTTTTGGAGCCCGTACTGAACGT ATGGAAACACGAATAATTGAAACATTGTTTTATTTGCAAAACAACCTTAAAGTAACTGGGCATATTTTTTTATTAGGTTC TAACCGAAAATTAATTCAAGCAGAAATAGAGCATCTTAAAAGCAAGCTAGAGAAATTGGAGGAATCTCAAAGGAACTATT GGAGTGAAGTATTTAATGACCCTGAGCAAACTACTGAAGCAAATGCTTTTGTTTTTTTATGGAAATGCATTGTTCCTCAG CAAACGCACACTCTTTTAGAAGATAAGATTGTTGGCATTAAATCCACTCGAATTGGAAATTCTTATATTGAACAATTTGG ACATCGTGCGACTACAGAGATTACAATCGAAGATTGGTTGACCTTCTATAAAGCCGGAGAGCCTCAAGCTATTTTTGCTC TCGCTGAACAACCTTATATTCGTTTAGCTGATCAGTTAAAATTTACAGTGCTTTCCAAAGGTAAAAAGGCCAATACAGAT GAGCTAATAGAACGAATTAAGAACACAACTTTTTATTTTGCCTTTCCAAACTCAAGCTTTAGCCCACTTATAAGTGTGAT ATTAGACGAAATTGGCCGTAATGTATACCGGATTTCCGATACTTTAAAGTATCTTGAAAGTCTCGAGTAG
Upstream 100 bases:
>100_bases TTTATTTCCAAATGCATAATCGAATTTGTTAAGTTAATTTGTCCTCTTAACATTCTAGGCAAATGAATGTGGAATATTAA AAAAAGATAGGGGAAAAGTC
Downstream 100 bases:
>100_bases TGTAGGTGCAGGATTCATACTTCACAGTTTGGCAGAAAATCTTTATTGCCTATACGCCAATAAAGGGCTGTAAGCTCCTT GGTAATTGACATTGCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLAPQFQSLLTLLVQLDELDCKA LTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER METRIIETLFYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD ELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISDTLKYLESLE
Sequences:
>Translated_369_residues MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLAPQFQSLLTLLVQLDELDCKA LTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER METRIIETLFYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD ELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISDTLKYLESLE >Mature_369_residues MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLAPQFQSLLTLLVQLDELDCKA LTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER METRIIETLFYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD ELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISDTLKYLESLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42440; Mature: 42440
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEC PQFQSLLTLLVQLDELDCKALTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHH QKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTERMETRIIETLFYLQNNLKVTG HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHCCCEEEE HIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHEEEEEHHCCC QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYI HHHHHHHHHHCCEECCCCCHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCHH RLADQLKFTVLSKGKKANTDELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISD HHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHH TLKYLESLE HHHHHHHCC >Mature Secondary Structure MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEC PQFQSLLTLLVQLDELDCKALTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHH QKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTERMETRIIETLFYLQNNLKVTG HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHCCCEEEE HIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHEEEEEHHCCC QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYI HHHHHHHHHHCCEECCCCCHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCHH RLADQLKFTVLSKGKKANTDELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISD HHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHH TLKYLESLE HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA