Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447586

Identifier: 46447586

GI number: 46447586

Start: 2319305

End: 2320414

Strand: Direct

Name: 46447586

Synonym: pc1952

Alternate gene names: NA

Gene position: 2319305-2320414 (Clockwise)

Preceding gene: 46447585

Following gene: 46447591

Centisome position: 96.06

GC content: 34.86

Gene sequence:

>1110_bases
ATGCAAGTGTATCCAACAACATCTGTTTCTTCAGAAATTCATTATCATGTCCAAGAACAAAGTTTGAAGCATAAATTATC
TTCAACCGCTGAAAAAATTATACAACTTAATCCAAGTCTACTCTTAGGTGAGTCTAATTTATTCAACTATGATTCGACAA
ACCACGCCATTGTGTTAGCACCCCAGTTTCAGAGTCTCTTAACATTACTCGTTCAGCTAGATGAGTTAGATTGTAAAGCT
TTAACAGCAAATTGCTTGTATGATCTGAATTCAATTCTCCAGCAATCTCAAGGTATTCGAGGAGGCTTATTGCGTAAAGA
AGGAACAGAAAGATGGCATTTAGAAGATAATCTTACTAAGCAAAAATACAGCCAAACTTTCAATGTATTATTACAGCAAT
TAGGTTTCGTTTTTCCAAAATCTATTGATAGTGAAATGACCGTTGATCACTGTATTGTTTTTGGAGCCCGTACTGAACGT
ATGGAAACACGAATAATTGAAACATTGTTTTATTTGCAAAACAACCTTAAAGTAACTGGGCATATTTTTTTATTAGGTTC
TAACCGAAAATTAATTCAAGCAGAAATAGAGCATCTTAAAAGCAAGCTAGAGAAATTGGAGGAATCTCAAAGGAACTATT
GGAGTGAAGTATTTAATGACCCTGAGCAAACTACTGAAGCAAATGCTTTTGTTTTTTTATGGAAATGCATTGTTCCTCAG
CAAACGCACACTCTTTTAGAAGATAAGATTGTTGGCATTAAATCCACTCGAATTGGAAATTCTTATATTGAACAATTTGG
ACATCGTGCGACTACAGAGATTACAATCGAAGATTGGTTGACCTTCTATAAAGCCGGAGAGCCTCAAGCTATTTTTGCTC
TCGCTGAACAACCTTATATTCGTTTAGCTGATCAGTTAAAATTTACAGTGCTTTCCAAAGGTAAAAAGGCCAATACAGAT
GAGCTAATAGAACGAATTAAGAACACAACTTTTTATTTTGCCTTTCCAAACTCAAGCTTTAGCCCACTTATAAGTGTGAT
ATTAGACGAAATTGGCCGTAATGTATACCGGATTTCCGATACTTTAAAGTATCTTGAAAGTCTCGAGTAG

Upstream 100 bases:

>100_bases
TTTATTTCCAAATGCATAATCGAATTTGTTAAGTTAATTTGTCCTCTTAACATTCTAGGCAAATGAATGTGGAATATTAA
AAAAAGATAGGGGAAAAGTC

Downstream 100 bases:

>100_bases
TGTAGGTGCAGGATTCATACTTCACAGTTTGGCAGAAAATCTTTATTGCCTATACGCCAATAAAGGGCTGTAAGCTCCTT
GGTAATTGACATTGCCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLAPQFQSLLTLLVQLDELDCKA
LTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER
METRIIETLFYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD
ELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISDTLKYLESLE

Sequences:

>Translated_369_residues
MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLAPQFQSLLTLLVQLDELDCKA
LTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER
METRIIETLFYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD
ELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISDTLKYLESLE
>Mature_369_residues
MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLAPQFQSLLTLLVQLDELDCKA
LTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER
METRIIETLFYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD
ELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISDTLKYLESLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42440; Mature: 42440

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEC
PQFQSLLTLLVQLDELDCKALTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHH
QKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTERMETRIIETLFYLQNNLKVTG
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHCCCEEEE
HIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHEEEEEHHCCC
QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYI
HHHHHHHHHHCCEECCCCCHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCHH
RLADQLKFTVLSKGKKANTDELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISD
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHH
TLKYLESLE
HHHHHHHCC
>Mature Secondary Structure
MQVYPTTSVSSEIHYHVQEQSLKHKLSSTAEKIIQLNPSLLLGESNLFNYDSTNHAIVLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEC
PQFQSLLTLLVQLDELDCKALTANCLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTK
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHH
QKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTERMETRIIETLFYLQNNLKVTG
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHCCCEEEE
HIFLLGSNRKLIQAEIEHLKSKLEKLEESQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHEEEEEHHCCC
QTHTLLEDKIVGIKSTRIGNSYIEQFGHRATTEITIEDWLTFYKAGEPQAIFALAEQPYI
HHHHHHHHHHCCEECCCCCHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCHH
RLADQLKFTVLSKGKKANTDELIERIKNTTFYFAFPNSSFSPLISVILDEIGRNVYRISD
HHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHH
TLKYLESLE
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA