Click here to switch to the map view.

The map label for this gene is 46447585

Identifier: 46447585

GI number: 46447585

Start: 2318749

End: 2319084

Strand: Direct

Name: 46447585

Synonym: pc1951

Alternate gene names: NA

Gene position: 2318749-2319084 (Clockwise)

Preceding gene: 46447582

Following gene: 46447586

Centisome position: 96.04

GC content: 31.55

Gene sequence:

>336_bases
ATGTCGCATGCCGTGATTGAAAATCATAATCGACTTGGTAATCAAGAAGAAACAGGGGCGTTAAATGAAGCAATTGCAGA
TACTGTTGCTATAGCATTTAAACAAAAAATAGATCTTACTGATAATCCGTGGGAAATTAGTGATATTCGTAACTTAAGCA
CAGCTCCTAAAAAATTTAAGTCCGTACGTATCTGTACCAAAGATAATGATTTCGGATATATGCATAAAAATAATTTAATT
ATTAGCCACACATTTTATCTTGCTTCAACAAACCTGAACTATGATTCAACAAATTGTGATTTGCTTTTAGGAATTTGGTT
TAAGTCTATGTTATAA

Upstream 100 bases:

>100_bases
CCATTACCCTGAAAAAAATGCCTATTATGCTCCTTGGAAAGAGGAATGTTTCGCTTTTGATAACGAATTTGCTTCTCAGC
CAGAGGTTGTGTGTCATGAG

Downstream 100 bases:

>100_bases
CTTGAAGATAAAAGTTTTACAGGATTTAAAAATAAGACACTTAAAGTTAGTAAGGAAGTTTTTTCAAGTTGGCAGTATTA
TTATCAATGCAATCAAGAGA

Product: metalloproteinase

Products: NA

Alternate protein names: Metalloendopeptidase; Metalloprotease; Extracellular Metalloproteinase

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSHAVIENHNRLGNQEETGALNEAIADTVAIAFKQKIDLTDNPWEISDIRNLSTAPKKFKSVRICTKDNDFGYMHKNNLI
ISHTFYLASTNLNYDSTNCDLLLGIWFKSML

Sequences:

>Translated_111_residues
MSHAVIENHNRLGNQEETGALNEAIADTVAIAFKQKIDLTDNPWEISDIRNLSTAPKKFKSVRICTKDNDFGYMHKNNLI
ISHTFYLASTNLNYDSTNCDLLLGIWFKSML
>Mature_110_residues
SHAVIENHNRLGNQEETGALNEAIADTVAIAFKQKIDLTDNPWEISDIRNLSTAPKKFKSVRICTKDNDFGYMHKNNLII
SHTFYLASTNLNYDSTNCDLLLGIWFKSML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12620; Mature: 12489

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHAVIENHNRLGNQEETGALNEAIADTVAIAFKQKIDLTDNPWEISDIRNLSTAPKKFK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH
SVRICTKDNDFGYMHKNNLIISHTFYLASTNLNYDSTNCDLLLGIWFKSML
EEEEEECCCCCCEEECCCEEEEEEEEEEECCCCCCCCCCCEEEEHHHHHCC
>Mature Secondary Structure 
SHAVIENHNRLGNQEETGALNEAIADTVAIAFKQKIDLTDNPWEISDIRNLSTAPKKFK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH
SVRICTKDNDFGYMHKNNLIISHTFYLASTNLNYDSTNCDLLLGIWFKSML
EEEEEECCCCCCEEECCCEEEEEEEEEEECCCCCCCCCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA