| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447579
Identifier: 46447579
GI number: 46447579
Start: 2311956
End: 2312249
Strand: Direct
Name: 46447579
Synonym: pc1945
Alternate gene names: NA
Gene position: 2311956-2312249 (Clockwise)
Preceding gene: 46447575
Following gene: 46447580
Centisome position: 95.75
GC content: 35.03
Gene sequence:
>294_bases ATGTACGCACTGCGGATTAGATTTGGTAAAAAAAAATGGTGCTACAAGGCAAGAAAAGCAAAATCTCTCTTAACAAACTG GTTATCATGGGGTTCTGGGCTAGGAAGGATGATTAATATTTGTGAACAACAAGGAATACCTGTTCCCAAATTTGAAGAGT TAGGAAATTTTTTTCGCACAACTTCATATCACGGTGTTAGTAACTTTACCAAAGTTGAACAGTGGCAAAGACAAATTATT GAGTACTTAAAACTCCATAAAGAAATACTACCTAAGAAAGCCCAAACAATTTGA
Upstream 100 bases:
>100_bases TGTCGAATATGCCAAGACCGAAAAATTAAATGTTGTTAGAGAAATTCAATTGTAATTTGATAGATTAATTGTTCTAATTC GAGCAGAGAAGAGCAATGAA
Downstream 100 bases:
>100_bases AATGTTAGTTCAAATACAACAAGCTCGAGATCAAAAAAGAAATTTAGTTTAAGGAGTTAAAAAGCTATATAGATTGCTAT TGCATTCAAGAAAGAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRTTSYHGVSNFTKVEQWQRQII EYLKLHKEILPKKAQTI
Sequences:
>Translated_97_residues MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRTTSYHGVSNFTKVEQWQRQII EYLKLHKEILPKKAQTI >Mature_97_residues MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRTTSYHGVSNFTKVEQWQRQII EYLKLHKEILPKKAQTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11507; Mature: 11507
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRT CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH TSYHGVSNFTKVEQWQRQIIEYLKLHKEILPKKAQTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MYALRIRFGKKKWCYKARKAKSLLTNWLSWGSGLGRMINICEQQGIPVPKFEELGNFFRT CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH TSYHGVSNFTKVEQWQRQIIEYLKLHKEILPKKAQTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA