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The map label for this gene is 46447564

Identifier: 46447564

GI number: 46447564

Start: 2298379

End: 2298708

Strand: Reverse

Name: 46447564

Synonym: pc1930

Alternate gene names: NA

Gene position: 2298708-2298379 (Counterclockwise)

Preceding gene: 46447565

Following gene: 46447563

Centisome position: 95.21

GC content: 43.33

Gene sequence:

>330_bases
GTGATTACCTATTCAAATAGCATTATGGAAAGGCTTCTAGAGCATATTGGCGGGAGAAAAGGACATGTTTTCATTACGAG
ATTTGGAAAGCCTGTGATGATCAATCAAGTTGCTGTGACATTTGCCAAAGCTGGGAAAGAGGCCGGTATTCCGTTTAAAA
TCACCCCGCACGTCTTGAGGGCATCTGCTGTCACGTATCTTAAACAGCAGGGGTTCCAAGACAGCGATATTATGCGTGTG
ACTGGACATGCTTCCTCGGAGATGGTTTATGCTTACGATAAATCCGCTCGATCAGATAATGCCAGCAAAAAAGTTAACTT
AATACCATAG

Upstream 100 bases:

>100_bases
GGTAAACGAAGTTTTGTCCCTGCAAACCCATCAAATCGATTGAGAGAACTGCGAAATCACCTTTCCTCAGTCAAAAATGA
AGGGAGTTTACAAGGAGACT

Downstream 100 bases:

>100_bases
AGGTTCTGAATGAACGCTAAGAAGAACGAGATCTTTGATCCTAAGAGCTACGCTTGTGTTTTTAGAACACATTGGGAAAG
TTATTAAGGAAGGGGAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MITYSNSIMERLLEHIGGRKGHVFITRFGKPVMINQVAVTFAKAGKEAGIPFKITPHVLRASAVTYLKQQGFQDSDIMRV
TGHASSEMVYAYDKSARSDNASKKVNLIP

Sequences:

>Translated_109_residues
MITYSNSIMERLLEHIGGRKGHVFITRFGKPVMINQVAVTFAKAGKEAGIPFKITPHVLRASAVTYLKQQGFQDSDIMRV
TGHASSEMVYAYDKSARSDNASKKVNLIP
>Mature_109_residues
MITYSNSIMERLLEHIGGRKGHVFITRFGKPVMINQVAVTFAKAGKEAGIPFKITPHVLRASAVTYLKQQGFQDSDIMRV
TGHASSEMVYAYDKSARSDNASKKVNLIP

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 12070; Mature: 12070

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITYSNSIMERLLEHIGGRKGHVFITRFGKPVMINQVAVTFAKAGKEAGIPFKITPHVLR
CCEECHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCEEECHHHHH
ASAVTYLKQQGFQDSDIMRVTGHASSEMVYAYDKSARSDNASKKVNLIP
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCC
>Mature Secondary Structure
MITYSNSIMERLLEHIGGRKGHVFITRFGKPVMINQVAVTFAKAGKEAGIPFKITPHVLR
CCEECHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCEEECHHHHH
ASAVTYLKQQGFQDSDIMRVTGHASSEMVYAYDKSARSDNASKKVNLIP
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202459 [H]