Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447533

Identifier: 46447533

GI number: 46447533

Start: 2262376

End: 2263794

Strand: Reverse

Name: 46447533

Synonym: pc1899

Alternate gene names: NA

Gene position: 2263794-2262376 (Counterclockwise)

Preceding gene: 46447535

Following gene: 46447532

Centisome position: 93.76

GC content: 35.73

Gene sequence:

>1419_bases
ATGATCAATCGCTGGTTAATGGGCTTAAATTCTATTATCTTAGGAAGCTGTTGTCTTTTAGCTATTGGAATTGGAGTGAT
GAAGTTTACTTATTCCAATCAGATTATTTGTAGAGATCCTAAGGCAAACCTATGTGGATTGCCAAAAGGAGCTTTTGAAT
TATCAACAGAGTCTTATGAACAGTTAAATGGCCCTTTATTAGCTTTAAATGAAGCTTCTCCTTCTTTGCAGCTTCCCGAT
TTGCGACAACAATTGATTTATTATGGAAAAAACAGTAGACCAGATGCTCAGTCTGAACAAACCTTGTTGCATTTTGCTTT
TAATACAAATAAAAATATTGTATCGATTTCTCCTGGGGAGCGACTTTACTTAGTTTACGATAAAGAAAGTGTTCCAAATA
AATACGTTTTTAGTCCTCAGAATAAAAAAACGTCTTTGTGGATAGAAGCAATGTTGGCTGATTCTGAAGTTGTTGTTAAG
TTAACTTTGGAAAATGACAAAGGAGACTTGATTACAGAGCCTGAAAATCATTATCAATTTCGACTTCCTGAAAAAGAATT
CATTCGCTTTGCTGGGAAAGTTTGGGAATTGGGAACATGGAGAGTCGATGGAACACTTTTAGCCAGACAAAAAGCGCGCT
GGTTTGGGATTGATCGGTTTTTAGAAAAGCACGGAGGAGACGAATACCAACACTGCTTGGGCAAACAAAGAGTCGATTTT
GGGGAAAATGAAAATATTTATTCTGTTTTTATTGGCCCTGGAGATTGTTTAATTTGGGATGAAAATCAATGGAAAGTCAT
TCAACCAGGAGCAGGTTCACGGGCTTATCCACTTTTGGTCGTCAAAAAAATTGATGAGCGATTATTGACTTTGGAATTGT
GGGATGTAGAAGGGAAAGGTAAGATCCTGTTGAATTTATTAAAATCTGTTGAACCTTGGATGGTACAAAATGCTCAAAAT
ATTCAACATATGTTTAAATTTGTCGGGGCCAAAACAAGGTCGCAATGTGTATTTGAAATTAATAATGAAAGAATGATTGT
TAGTCCTTCCGACTGGCTTTTGATGACTCAGAAAGGATGGAAAAAACTTACTTCTGCTGAGGAAATAGATGATTATGTAA
AGCGTAAAACGGCTGGGACATTGTTTGTATTTGAAAGATTAGTGCGTAAAGATGATCGCCAATTGATGTTGGGAACTTTA
TATAATTCTACTCGTAGTGATAGTCAATCAATTGAACTGACTTTACAGCAAGGTAATAGCAATAAATCTTTTACAACTAA
AGAAATGAAGGATAAAGAGGTTAAAGAGCCAGGAGAAACGATTTTGCAAACAGAAAAAGGGATTACTAGTGTTGGTAAGA
CTGAAGCTGATTTGGCAAATCGTATTCCAGTTGTTCCTAATCTCTCGAATAAGAATTAA

Upstream 100 bases:

>100_bases
TGATATGAGTTTTTACTAATTGTTTGTTTTTTTTAAATAAAAATGACATAATCCATTATTAATCAATAGGTAAATCTAAA
AATAAAAAAAAGAGAAACAG

Downstream 100 bases:

>100_bases
AACAAGGCTTCTTATAAAGTTGTGTGTTGAATGACAATAGATTTCATTGACACTGAATTAAATTTGGTAAGAGTAGATTA
AAGCGAATCGACGGTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MINRWLMGLNSIILGSCCLLAIGIGVMKFTYSNQIICRDPKANLCGLPKGAFELSTESYEQLNGPLLALNEASPSLQLPD
LRQQLIYYGKNSRPDAQSEQTLLHFAFNTNKNIVSISPGERLYLVYDKESVPNKYVFSPQNKKTSLWIEAMLADSEVVVK
LTLENDKGDLITEPENHYQFRLPEKEFIRFAGKVWELGTWRVDGTLLARQKARWFGIDRFLEKHGGDEYQHCLGKQRVDF
GENENIYSVFIGPGDCLIWDENQWKVIQPGAGSRAYPLLVVKKIDERLLTLELWDVEGKGKILLNLLKSVEPWMVQNAQN
IQHMFKFVGAKTRSQCVFEINNERMIVSPSDWLLMTQKGWKKLTSAEEIDDYVKRKTAGTLFVFERLVRKDDRQLMLGTL
YNSTRSDSQSIELTLQQGNSNKSFTTKEMKDKEVKEPGETILQTEKGITSVGKTEADLANRIPVVPNLSNKN

Sequences:

>Translated_472_residues
MINRWLMGLNSIILGSCCLLAIGIGVMKFTYSNQIICRDPKANLCGLPKGAFELSTESYEQLNGPLLALNEASPSLQLPD
LRQQLIYYGKNSRPDAQSEQTLLHFAFNTNKNIVSISPGERLYLVYDKESVPNKYVFSPQNKKTSLWIEAMLADSEVVVK
LTLENDKGDLITEPENHYQFRLPEKEFIRFAGKVWELGTWRVDGTLLARQKARWFGIDRFLEKHGGDEYQHCLGKQRVDF
GENENIYSVFIGPGDCLIWDENQWKVIQPGAGSRAYPLLVVKKIDERLLTLELWDVEGKGKILLNLLKSVEPWMVQNAQN
IQHMFKFVGAKTRSQCVFEINNERMIVSPSDWLLMTQKGWKKLTSAEEIDDYVKRKTAGTLFVFERLVRKDDRQLMLGTL
YNSTRSDSQSIELTLQQGNSNKSFTTKEMKDKEVKEPGETILQTEKGITSVGKTEADLANRIPVVPNLSNKN
>Mature_472_residues
MINRWLMGLNSIILGSCCLLAIGIGVMKFTYSNQIICRDPKANLCGLPKGAFELSTESYEQLNGPLLALNEASPSLQLPD
LRQQLIYYGKNSRPDAQSEQTLLHFAFNTNKNIVSISPGERLYLVYDKESVPNKYVFSPQNKKTSLWIEAMLADSEVVVK
LTLENDKGDLITEPENHYQFRLPEKEFIRFAGKVWELGTWRVDGTLLARQKARWFGIDRFLEKHGGDEYQHCLGKQRVDF
GENENIYSVFIGPGDCLIWDENQWKVIQPGAGSRAYPLLVVKKIDERLLTLELWDVEGKGKILLNLLKSVEPWMVQNAQN
IQHMFKFVGAKTRSQCVFEINNERMIVSPSDWLLMTQKGWKKLTSAEEIDDYVKRKTAGTLFVFERLVRKDDRQLMLGTL
YNSTRSDSQSIELTLQQGNSNKSFTTKEMKDKEVKEPGETILQTEKGITSVGKTEADLANRIPVVPNLSNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53842; Mature: 53842

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRWLMGLNSIILGSCCLLAIGIGVMKFTYSNQIICRDPKANLCGLPKGAFELSTESYE
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCCCCCCCCEECCCHHHH
QLNGPLLALNEASPSLQLPDLRQQLIYYGKNSRPDAQSEQTLLHFAFNTNKNIVSISPGE
HCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCC
RLYLVYDKESVPNKYVFSPQNKKTSLWIEAMLADSEVVVKLTLENDKGDLITEPENHYQF
EEEEEECCCCCCCCEEECCCCCCCEEEEEEEECCCEEEEEEEEECCCCCEECCCCCCEEE
RLPEKEFIRFAGKVWELGTWRVDGTLLARQKARWFGIDRFLEKHGGDEYQHCLGKQRVDF
ECCHHHHHHHHHHEEECEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
GENENIYSVFIGPGDCLIWDENQWKVIQPGAGSRAYPLLVVKKIDERLLTLELWDVEGKG
CCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCC
KILLNLLKSVEPWMVQNAQNIQHMFKFVGAKTRSQCVFEINNERMIVSPSDWLLMTQKGW
HHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCEEEEECHHH
KKLTSAEEIDDYVKRKTAGTLFVFERLVRKDDRQLMLGTLYNSTRSDSQSIELTLQQGNS
HHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCC
NKSFTTKEMKDKEVKEPGETILQTEKGITSVGKTEADLANRIPVVPNLSNKN
CCCEECHHHCCHHHCCCCHHHHHHHCCCHHCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MINRWLMGLNSIILGSCCLLAIGIGVMKFTYSNQIICRDPKANLCGLPKGAFELSTESYE
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCCCCCCCCEECCCHHHH
QLNGPLLALNEASPSLQLPDLRQQLIYYGKNSRPDAQSEQTLLHFAFNTNKNIVSISPGE
HCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCC
RLYLVYDKESVPNKYVFSPQNKKTSLWIEAMLADSEVVVKLTLENDKGDLITEPENHYQF
EEEEEECCCCCCCCEEECCCCCCCEEEEEEEECCCEEEEEEEEECCCCCEECCCCCCEEE
RLPEKEFIRFAGKVWELGTWRVDGTLLARQKARWFGIDRFLEKHGGDEYQHCLGKQRVDF
ECCHHHHHHHHHHEEECEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
GENENIYSVFIGPGDCLIWDENQWKVIQPGAGSRAYPLLVVKKIDERLLTLELWDVEGKG
CCCCCEEEEEECCCCEEEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCC
KILLNLLKSVEPWMVQNAQNIQHMFKFVGAKTRSQCVFEINNERMIVSPSDWLLMTQKGW
HHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCEEEEECHHH
KKLTSAEEIDDYVKRKTAGTLFVFERLVRKDDRQLMLGTLYNSTRSDSQSIELTLQQGNS
HHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCC
NKSFTTKEMKDKEVKEPGETILQTEKGITSVGKTEADLANRIPVVPNLSNKN
CCCEECHHHCCHHHCCCCHHHHHHHCCCHHCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA