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The map label for this gene is gspD [H]

Identifier: 46447532

GI number: 46447532

Start: 2259724

End: 2262213

Strand: Reverse

Name: gspD [H]

Synonym: pc1898

Alternate gene names: 46447532

Gene position: 2262213-2259724 (Counterclockwise)

Preceding gene: 46447533

Following gene: 46447531

Centisome position: 93.69

GC content: 36.22

Gene sequence:

>2490_bases
TTGTGGGCACAATCAATATCAGAAAAAAAAGCTAACCTTCAATCTTCTGAAAGTGATTTAGATCAAGAAATGGATCGTTT
CTTGACGCAAGTAAATAGAGAATCTCAACACATTCAATTTCAAATTGAACGGCTTTATGATGAGGTTTTTAAACTTTACC
AAGCAAAGGCTCCTGTAGAAGATTACAAAGAATTACTCAATCGCATTAACCAACATAAAAAGCATTTGAATCAACTTGAA
AATAGATGGCGTGACTTAGCTGTCCGAAGTAATAAAGGTGAGGCTTATGGACTTTGGCATGCCCCAGATACAACTTTAGA
ACAGTTGATTATTGATTATGGATCTCAAGATTATGTCTATTTAATTCCTCCAGACGTAGGTGCAATTCGCTTAAGTATTG
ATTCTAATTTACCAATTCCCAGGTCATCTTGGAATGAAATGTTAGAATTAATTTTAAATCAAAATGGAGTAGGAATTAAA
ACTTTGAACCCTTACCTGCGTCAACTTTACTTAATTACTCTCAATAATTCTAACCTACGTTTGATTACTAACAAACGGCA
AGATTTAGAAATTCTTCCGATAGATTCAAAAATTGCTTTTGTATTATCTCCAGAACCATCAGAAGTTCGGCGAGCTTATT
CTTTCCTAGAAAGATTTATCAATCATAATACAACAGTTTTACAAGTTCTTGGAAGAGATATTCTGTTAGTGGGTCAAGTG
GGTGAAATTCAAGATATTTTAAAACTTTATGATTTTATTGCCTCAAATCGCGGAGAAAAAGACTATCGCCTCATTCCTAT
TTGCAAGGTTCGTGCAGATGAAATGGCCCGTATTTTAACAGCAATTTTTGATCAAGAAGAAGGAGACACTTCTTTAGCCA
TTCCTGCAAATGGAGAATCTTCCCGACAATATGCTAGAGGAGATGTCAATGGATTGAAAATTATTGTCTTAGATAACATG
ACGCAAGCACTTTTTGTTGTGGGAACAAAAGAAGAGATCCGCAAAGCAGAAGACGTTGTACGAAATGTAGAAAATCGGAT
TGGCGGAGTAAGAGACAAAACAGTTTTTTGGTATACCGTAAAACATTCTGAATCTGAAGAGCTGGCTGATGTTTTATTCA
AAGTATACAATTTAATGATCACAACAGGGACGGGTGTTAGATCAGACGGACAAGGAATAGTTTCAAGAAATGCAGGAACT
GAAATCAATGTTATAGATAATAATTCAGCTCCTCCTCCCATAACGCCTCCTATTCTTAACCCACAAAAAGAGCCTCCCCA
AACCTTATATGGACAAGAAGGCTATTACCAAGAAGGAGGGTTCATTGTTAATCCGGCTCCTGCTCAACCTGGTGCCTTTA
TCCAAACAGATCCCAATGTAGGACGAGATAATTTTATTGTTGATGCGAAATCTGGATCAATTGTGATGGTTGTGGAAGCT
GACATTCTTCCAAAAATCAAAGAGTTACTCAGAAAATTAGATGTTCCTAAAAAAATGGTACAGATTGAAACACTACTTTT
TGAAAAGATTTTAACCCGTGAAAATACATTTGGATTAAATCTTTTAAAAATTGGTGAGCATATTGCTAAAAACACAAATT
TAACTGGAGCAACTTTTAATAACATTTTTCCTGTTAAGGGAGAATTTACTCCAGCTAACGCAGGGGTTTTTGACTTTTTA
TTAAGCCGGAAACAAACAAGTAGTGGTATTCCAGCCTTTGATTTAGCTTATCGCTTTTTATTGTCTCAGGATGATGTACA
GATTAATTCAAATCCATCCATTTTGACCATGAATCAAACTCCCGCAACAATCGCTGTCAATGAAGATATTTCTATCAATA
CGGGGATTTTTGAAGTGGAGACTGCTAAAGGAACAACGCTGAAAGATGCTTTTACGCGTGCTCAATACGGGATTACAATT
AGTGTTAAACCGACTATTCATTTAAACCAACATGATACAGAGGATGAATGGGATTTTGATTATGTGACACTTGAAACGGA
TATTACTTTTGATACAATTCATGCAGGAGGAGATCGCTCACGACCTGATGTGACGAGACGCCATATTACTAATCAAGTGC
AAGTTCCTGATGGAGATACAATAATTTTAGGAGGATTAAGGCGAAAGACAACGAATGATAATAAAGATTCCATTCCTTTT
TTGGGAGAATTACCGGGACTAGGTAAATTGTTTAGTACGAATTCCCTTAAAGACAGTAGCTCTGAAATGTTTATTTTTAT
TACTCCTCATATTGTAAAAGATCCAAAAGAGCAGCTCCAATGTCTAAGACAAGAGCTTTTATGTTTGCGTCCAGGGGATG
TTCCTTACTTTCTAGAATGTGTTCAAGAAGCTCATCGTTATGAAAAAACAAGATTGATGGAAGGGAGTATGACGGTATTA
TTCGGTCGTCCTCGTGAACGTTATTACATCTCTGATTGCTGCAAAGTAGATGACCATAGCCAACTTGAAGGAGAATATGA
CGGGCGATAA

Upstream 100 bases:

>100_bases
TTTGGTAAGAGTAGATTAAAGCGAATCGACGGTAAACATGATAAAGCAACTGGTTTGGATAGTAGGTCTTTTTTGCCTAG
CAGGATCCCCTTTTCATCAA

Downstream 100 bases:

>100_bases
TGAGGAAACAGGAAATAAAGAGTTTTTATTAAAAGAAAAATTAGGAGGAGAACAAGCTCAAGCGAAGCTTGCCGAACAAT
TTGGGATGACTTGTTACCTT

Product: putative protein of the general secretion pathway

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
MWAQSISEKKANLQSSESDLDQEMDRFLTQVNRESQHIQFQIERLYDEVFKLYQAKAPVEDYKELLNRINQHKKHLNQLE
NRWRDLAVRSNKGEAYGLWHAPDTTLEQLIIDYGSQDYVYLIPPDVGAIRLSIDSNLPIPRSSWNEMLELILNQNGVGIK
TLNPYLRQLYLITLNNSNLRLITNKRQDLEILPIDSKIAFVLSPEPSEVRRAYSFLERFINHNTTVLQVLGRDILLVGQV
GEIQDILKLYDFIASNRGEKDYRLIPICKVRADEMARILTAIFDQEEGDTSLAIPANGESSRQYARGDVNGLKIIVLDNM
TQALFVVGTKEEIRKAEDVVRNVENRIGGVRDKTVFWYTVKHSESEELADVLFKVYNLMITTGTGVRSDGQGIVSRNAGT
EINVIDNNSAPPPITPPILNPQKEPPQTLYGQEGYYQEGGFIVNPAPAQPGAFIQTDPNVGRDNFIVDAKSGSIVMVVEA
DILPKIKELLRKLDVPKKMVQIETLLFEKILTRENTFGLNLLKIGEHIAKNTNLTGATFNNIFPVKGEFTPANAGVFDFL
LSRKQTSSGIPAFDLAYRFLLSQDDVQINSNPSILTMNQTPATIAVNEDISINTGIFEVETAKGTTLKDAFTRAQYGITI
SVKPTIHLNQHDTEDEWDFDYVTLETDITFDTIHAGGDRSRPDVTRRHITNQVQVPDGDTIILGGLRRKTTNDNKDSIPF
LGELPGLGKLFSTNSLKDSSSEMFIFITPHIVKDPKEQLQCLRQELLCLRPGDVPYFLECVQEAHRYEKTRLMEGSMTVL
FGRPRERYYISDCCKVDDHSQLEGEYDGR

Sequences:

>Translated_829_residues
MWAQSISEKKANLQSSESDLDQEMDRFLTQVNRESQHIQFQIERLYDEVFKLYQAKAPVEDYKELLNRINQHKKHLNQLE
NRWRDLAVRSNKGEAYGLWHAPDTTLEQLIIDYGSQDYVYLIPPDVGAIRLSIDSNLPIPRSSWNEMLELILNQNGVGIK
TLNPYLRQLYLITLNNSNLRLITNKRQDLEILPIDSKIAFVLSPEPSEVRRAYSFLERFINHNTTVLQVLGRDILLVGQV
GEIQDILKLYDFIASNRGEKDYRLIPICKVRADEMARILTAIFDQEEGDTSLAIPANGESSRQYARGDVNGLKIIVLDNM
TQALFVVGTKEEIRKAEDVVRNVENRIGGVRDKTVFWYTVKHSESEELADVLFKVYNLMITTGTGVRSDGQGIVSRNAGT
EINVIDNNSAPPPITPPILNPQKEPPQTLYGQEGYYQEGGFIVNPAPAQPGAFIQTDPNVGRDNFIVDAKSGSIVMVVEA
DILPKIKELLRKLDVPKKMVQIETLLFEKILTRENTFGLNLLKIGEHIAKNTNLTGATFNNIFPVKGEFTPANAGVFDFL
LSRKQTSSGIPAFDLAYRFLLSQDDVQINSNPSILTMNQTPATIAVNEDISINTGIFEVETAKGTTLKDAFTRAQYGITI
SVKPTIHLNQHDTEDEWDFDYVTLETDITFDTIHAGGDRSRPDVTRRHITNQVQVPDGDTIILGGLRRKTTNDNKDSIPF
LGELPGLGKLFSTNSLKDSSSEMFIFITPHIVKDPKEQLQCLRQELLCLRPGDVPYFLECVQEAHRYEKTRLMEGSMTVL
FGRPRERYYISDCCKVDDHSQLEGEYDGR
>Mature_829_residues
MWAQSISEKKANLQSSESDLDQEMDRFLTQVNRESQHIQFQIERLYDEVFKLYQAKAPVEDYKELLNRINQHKKHLNQLE
NRWRDLAVRSNKGEAYGLWHAPDTTLEQLIIDYGSQDYVYLIPPDVGAIRLSIDSNLPIPRSSWNEMLELILNQNGVGIK
TLNPYLRQLYLITLNNSNLRLITNKRQDLEILPIDSKIAFVLSPEPSEVRRAYSFLERFINHNTTVLQVLGRDILLVGQV
GEIQDILKLYDFIASNRGEKDYRLIPICKVRADEMARILTAIFDQEEGDTSLAIPANGESSRQYARGDVNGLKIIVLDNM
TQALFVVGTKEEIRKAEDVVRNVENRIGGVRDKTVFWYTVKHSESEELADVLFKVYNLMITTGTGVRSDGQGIVSRNAGT
EINVIDNNSAPPPITPPILNPQKEPPQTLYGQEGYYQEGGFIVNPAPAQPGAFIQTDPNVGRDNFIVDAKSGSIVMVVEA
DILPKIKELLRKLDVPKKMVQIETLLFEKILTRENTFGLNLLKIGEHIAKNTNLTGATFNNIFPVKGEFTPANAGVFDFL
LSRKQTSSGIPAFDLAYRFLLSQDDVQINSNPSILTMNQTPATIAVNEDISINTGIFEVETAKGTTLKDAFTRAQYGITI
SVKPTIHLNQHDTEDEWDFDYVTLETDITFDTIHAGGDRSRPDVTRRHITNQVQVPDGDTIILGGLRRKTTNDNKDSIPF
LGELPGLGKLFSTNSLKDSSSEMFIFITPHIVKDPKEQLQCLRQELLCLRPGDVPYFLECVQEAHRYEKTRLMEGSMTVL
FGRPRERYYISDCCKVDDHSQLEGEYDGR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=325, Percent_Identity=25.5384615384615, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1789793, Length=184, Percent_Identity=24.4565217391304, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 93834; Mature: 93834

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAQSISEKKANLQSSESDLDQEMDRFLTQVNRESQHIQFQIERLYDEVFKLYQAKAPVE
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
DYKELLNRINQHKKHLNQLENRWRDLAVRSNKGEAYGLWHAPDTTLEQLIIDYGSQDYVY
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCEEE
LIPPDVGAIRLSIDSNLPIPRSSWNEMLELILNQNGVGIKTLNPYLRQLYLITLNNSNLR
EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHCEEEEEEEECCCCEE
LITNKRQDLEILPIDSKIAFVLSPEPSEVRRAYSFLERFINHNTTVLQVLGRDILLVGQV
EEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEHHCCCEEEEECC
GEIQDILKLYDFIASNRGEKDYRLIPICKVRADEMARILTAIFDQEEGDTSLAIPANGES
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCC
SRQYARGDVNGLKIIVLDNMTQALFVVGTKEEIRKAEDVVRNVENRIGGVRDKTVFWYTV
CCHHHCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
KHSESEELADVLFKVYNLMITTGTGVRSDGQGIVSRNAGTEINVIDNNSAPPPITPPILN
ECCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCC
PQKEPPQTLYGQEGYYQEGGFIVNPAPAQPGAFIQTDPNVGRDNFIVDAKSGSIVMVVEA
CCCCCCHHHCCCCCEEECCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEEC
DILPKIKELLRKLDVPKKMVQIETLLFEKILTRENTFGLNLLKIGEHIAKNTNLTGATFN
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
NIFPVKGEFTPANAGVFDFLLSRKQTSSGIPAFDLAYRFLLSQDDVQINSNPSILTMNQT
CEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEECCC
PATIAVNEDISINTGIFEVETAKGTTLKDAFTRAQYGITISVKPTIHLNQHDTEDEWDFD
CEEEEECCCCEECCCEEEEECCCCCCHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCE
YVTLETDITFDTIHAGGDRSRPDVTRRHITNQVQVPDGDTIILGGLRRKTTNDNKDSIPF
EEEEEECCEEEEEECCCCCCCCCHHHHHCCCEEECCCCCEEEECCCCCCCCCCCCCCCCC
LGELPGLGKLFSTNSLKDSSSEMFIFITPHIVKDPKEQLQCLRQELLCLRPGDVPYFLEC
CCCCCCCCCHHCCCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHEECCCCCHHHHHH
VQEAHRYEKTRLMEGSMTVLFGRPRERYYISDCCKVDDHSQLEGEYDGR
HHHHHHHHHHHEECCCEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWAQSISEKKANLQSSESDLDQEMDRFLTQVNRESQHIQFQIERLYDEVFKLYQAKAPVE
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
DYKELLNRINQHKKHLNQLENRWRDLAVRSNKGEAYGLWHAPDTTLEQLIIDYGSQDYVY
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCEEE
LIPPDVGAIRLSIDSNLPIPRSSWNEMLELILNQNGVGIKTLNPYLRQLYLITLNNSNLR
EECCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHCEEEEEEEECCCCEE
LITNKRQDLEILPIDSKIAFVLSPEPSEVRRAYSFLERFINHNTTVLQVLGRDILLVGQV
EEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEHHCCCEEEEECC
GEIQDILKLYDFIASNRGEKDYRLIPICKVRADEMARILTAIFDQEEGDTSLAIPANGES
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCC
SRQYARGDVNGLKIIVLDNMTQALFVVGTKEEIRKAEDVVRNVENRIGGVRDKTVFWYTV
CCHHHCCCCCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
KHSESEELADVLFKVYNLMITTGTGVRSDGQGIVSRNAGTEINVIDNNSAPPPITPPILN
ECCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCC
PQKEPPQTLYGQEGYYQEGGFIVNPAPAQPGAFIQTDPNVGRDNFIVDAKSGSIVMVVEA
CCCCCCHHHCCCCCEEECCCEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEEC
DILPKIKELLRKLDVPKKMVQIETLLFEKILTRENTFGLNLLKIGEHIAKNTNLTGATFN
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
NIFPVKGEFTPANAGVFDFLLSRKQTSSGIPAFDLAYRFLLSQDDVQINSNPSILTMNQT
CEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEECCC
PATIAVNEDISINTGIFEVETAKGTTLKDAFTRAQYGITISVKPTIHLNQHDTEDEWDFD
CEEEEECCCCEECCCEEEEECCCCCCHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCE
YVTLETDITFDTIHAGGDRSRPDVTRRHITNQVQVPDGDTIILGGLRRKTTNDNKDSIPF
EEEEEECCEEEEEECCCCCCCCCHHHHHCCCEEECCCCCEEEECCCCCCCCCCCCCCCCC
LGELPGLGKLFSTNSLKDSSSEMFIFITPHIVKDPKEQLQCLRQELLCLRPGDVPYFLEC
CCCCCCCCCHHCCCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHEECCCCCHHHHHH
VQEAHRYEKTRLMEGSMTVLFGRPRERYYISDCCKVDDHSQLEGEYDGR
HHHHHHHHHHHEECCCEEEEECCCCCCEEHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]