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The map label for this gene is 46447517

Identifier: 46447517

GI number: 46447517

Start: 2244771

End: 2245649

Strand: Direct

Name: 46447517

Synonym: pc1883

Alternate gene names: NA

Gene position: 2244771-2245649 (Clockwise)

Preceding gene: 46447516

Following gene: 46447518

Centisome position: 92.97

GC content: 34.24

Gene sequence:

>879_bases
ATGAATCCAACTCTACTAGAAATTTTTCAACATATCCGCCGCATCCAAATTGAAACAACCCGTAATGTGGATGATCTTTT
TGCAGGAATTTACCGCTCAGCTTTTAAAGGTCGCGGCTTAGAATTTGAAGATGTTAGAGAATATCAACCAGGTGATGATA
TTCGAAGCATTGACTGGAATGTCACAGCTAGACTTCAAACACCCTATTTAAAAAATTTTCGAGAAGAAAGAGAGCTCACA
GTGATGTTGGTAGTTGACATCTCTGCCTCGTCTCATTTTAGCCATATCAAACAGTTAAAAAGTGAATTAATTGCAGAAGT
TGCTGCTTTATTAGCTTTTTCAGCTATTAAGAATCAAGACAATGTAGGATTGCTTCTATTTTCCAATCAAATAGAACTCT
ACTTGAAACCTAAAAAAGGGCTTCGACACGTTTTGAGAGTTATTCGTGAGCTTCTATTTTTTCAGCCTCAGTATCGGGGA
ACAGATCTTCAAAAAGCTTTAAGATTTTTAGGAAACGTCCAGAAAAAACAATCAACTTGCTTTCTAATTTCAGACTTTTT
GACACAACCTTTATTTCATGCAATTCATGTCACCGCCAAAAGACATGAACTTATCGGAATTCAACTCTATGACGAATATG
AACAAAATTTCCCCTCTATGGGATTAATTTCATTATATGATTTAGAATCAAATAAAAAAGCATTAATAGATTCATCTGAC
AAGTCCTTACAAAAGTTTTATCAAGAGTCATCAAAATATAGACAACAATTATGGCAAAAAACATTTGCCAAAGCTGGCGC
AGCATGGATTTCAATTCGAACAGATGAATCTTCTACTCAAGCATTGTATAACTTTTTTAAATTTAGGCATAAAAAGTGA

Upstream 100 bases:

>100_bases
CCATTTTAAGACATCGTTTACGACTTTCTTATGAGGCTGAAGCCGAGAATTTAACAACAGATGCTGTCATTCGACAAATT
TTAGATACGCTGCCTATCCC

Downstream 100 bases:

>100_bases
TTTTTTGGATCCGATTCATCCTATTCCTCCCTATATTCCTTCAAGCAGAATTAACATGGAATACTATCCAAAATGATATT
TCTATTGGATTAGAATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNPTLLEIFQHIRRIQIETTRNVDDLFAGIYRSAFKGRGLEFEDVREYQPGDDIRSIDWNVTARLQTPYLKNFREERELT
VMLVVDISASSHFSHIKQLKSELIAEVAALLAFSAIKNQDNVGLLLFSNQIELYLKPKKGLRHVLRVIRELLFFQPQYRG
TDLQKALRFLGNVQKKQSTCFLISDFLTQPLFHAIHVTAKRHELIGIQLYDEYEQNFPSMGLISLYDLESNKKALIDSSD
KSLQKFYQESSKYRQQLWQKTFAKAGAAWISIRTDESSTQALYNFFKFRHKK

Sequences:

>Translated_292_residues
MNPTLLEIFQHIRRIQIETTRNVDDLFAGIYRSAFKGRGLEFEDVREYQPGDDIRSIDWNVTARLQTPYLKNFREERELT
VMLVVDISASSHFSHIKQLKSELIAEVAALLAFSAIKNQDNVGLLLFSNQIELYLKPKKGLRHVLRVIRELLFFQPQYRG
TDLQKALRFLGNVQKKQSTCFLISDFLTQPLFHAIHVTAKRHELIGIQLYDEYEQNFPSMGLISLYDLESNKKALIDSSD
KSLQKFYQESSKYRQQLWQKTFAKAGAAWISIRTDESSTQALYNFFKFRHKK
>Mature_292_residues
MNPTLLEIFQHIRRIQIETTRNVDDLFAGIYRSAFKGRGLEFEDVREYQPGDDIRSIDWNVTARLQTPYLKNFREERELT
VMLVVDISASSHFSHIKQLKSELIAEVAALLAFSAIKNQDNVGLLLFSNQIELYLKPKKGLRHVLRVIRELLFFQPQYRG
TDLQKALRFLGNVQKKQSTCFLISDFLTQPLFHAIHVTAKRHELIGIQLYDEYEQNFPSMGLISLYDLESNKKALIDSSD
KSLQKFYQESSKYRQQLWQKTFAKAGAAWISIRTDESSTQALYNFFKFRHKK

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 34150; Mature: 34150

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTLLEIFQHIRRIQIETTRNVDDLFAGIYRSAFKGRGLEFEDVREYQPGDDIRSIDWN
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEECCCC
VTARLQTPYLKNFREERELTVMLVVDISASSHFSHIKQLKSELIAEVAALLAFSAIKNQD
EEEEECCHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NVGLLLFSNQIELYLKPKKGLRHVLRVIRELLFFQPQYRGTDLQKALRFLGNVQKKQSTC
CEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHH
FLISDFLTQPLFHAIHVTAKRHELIGIQLYDEYEQNFPSMGLISLYDLESNKKALIDSSD
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCEEEEECCCCCCEECCCCH
KSLQKFYQESSKYRQQLWQKTFAKAGAAWISIRTDESSTQALYNFFKFRHKK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPTLLEIFQHIRRIQIETTRNVDDLFAGIYRSAFKGRGLEFEDVREYQPGDDIRSIDWN
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEECCCC
VTARLQTPYLKNFREERELTVMLVVDISASSHFSHIKQLKSELIAEVAALLAFSAIKNQD
EEEEECCHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NVGLLLFSNQIELYLKPKKGLRHVLRVIRELLFFQPQYRGTDLQKALRFLGNVQKKQSTC
CEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHH
FLISDFLTQPLFHAIHVTAKRHELIGIQLYDEYEQNFPSMGLISLYDLESNKKALIDSSD
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCEEEEECCCCCCEECCCCH
KSLQKFYQESSKYRQQLWQKTFAKAGAAWISIRTDESSTQALYNFFKFRHKK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]