| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447445
Identifier: 46447445
GI number: 46447445
Start: 2164774
End: 2165235
Strand: Direct
Name: 46447445
Synonym: pc1811
Alternate gene names: NA
Gene position: 2164774-2165235 (Clockwise)
Preceding gene: 46447444
Following gene: 46447448
Centisome position: 89.66
GC content: 37.66
Gene sequence:
>462_bases TTGACAGTAACAATAACTGCACAACCTATAGAACGAGTGCGGCAAGAGATTATTCCAACCTCACCTCTAAAAGAGGCTTT TCATCCATTTGCCATTAAAGTCTCAGAAAAAAACCTTCCTCCTATTTCCTCTAAAGAAGAAATGCGCCTAAAAGCGCAAG AAATCGGCCAGTTAGTTTTGGATAAACACGTCAAACTCCGCAACGACGTTTCTTCTTATGGATCGGAAAGAACACAAGCA ATGAAATTTATAGAAGAATTAAAAGCGTTGTTGATGTTATTGAAACTCGATGGAAAGACTTCGTTTATATTGTGCCTAAG AAAACAGAAGAGACTCAAAAAAATCTCACTATTCGTAAGTATAACAATGGGGTCATTGAAGAAGTTCAATCTTCAAGAGA AAGTGAAGGTGGAGATCGGTGGACTTATTGGGAAGGATGAAGAATTTATCCAGATGGTGTAA
Upstream 100 bases:
>100_bases TTCTAATTTCGAAAATAAGAAATTAAGATTTTGCCGTTTTTTTTCTACTTTCGAACTTTCATAGAGTTTTCTTGCACGTT GAGCTAAATTTAGGACAATT
Downstream 100 bases:
>100_bases TAGAAACAGGAAGATTTGACGATTTTCGCTGGCATAAAGGAACGCATACGGAAAAGGAAACAACCACATATCGGCTTCCA GATACTTAGTAAATAGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTVTITAQPIERVRQEIIPTSPLKEAFHPFAIKVSEKNLPPISSKEEMRLKAQEIGQLVLDKHVKLRNDVSSYGSERTQA MKFIEELKALLMLLKLDGKTSFILCLRKQKRLKKISLFVSITMGSLKKFNLQEKVKVEIGGLIGKDEEFIQMV
Sequences:
>Translated_153_residues MTVTITAQPIERVRQEIIPTSPLKEAFHPFAIKVSEKNLPPISSKEEMRLKAQEIGQLVLDKHVKLRNDVSSYGSERTQA MKFIEELKALLMLLKLDGKTSFILCLRKQKRLKKISLFVSITMGSLKKFNLQEKVKVEIGGLIGKDEEFIQMV >Mature_152_residues TVTITAQPIERVRQEIIPTSPLKEAFHPFAIKVSEKNLPPISSKEEMRLKAQEIGQLVLDKHVKLRNDVSSYGSERTQAM KFIEELKALLMLLKLDGKTSFILCLRKQKRLKKISLFVSITMGSLKKFNLQEKVKVEIGGLIGKDEEFIQMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17468; Mature: 17337
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTITAQPIERVRQEIIPTSPLKEAFHPFAIKVSEKNLPPISSKEEMRLKAQEIGQLVL CEEEEEHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH DKHVKLRNDVSSYGSERTQAMKFIEELKALLMLLKLDGKTSFILCLRKQKRLKKISLFVS HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEE ITMGSLKKFNLQEKVKVEIGGLIGKDEEFIQMV EECCCHHHCCCHHHEEEEECCCCCCCHHHHHCC >Mature Secondary Structure TVTITAQPIERVRQEIIPTSPLKEAFHPFAIKVSEKNLPPISSKEEMRLKAQEIGQLVL EEEEEHHHHHHHHHHCCCCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH DKHVKLRNDVSSYGSERTQAMKFIEELKALLMLLKLDGKTSFILCLRKQKRLKKISLFVS HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEE ITMGSLKKFNLQEKVKVEIGGLIGKDEEFIQMV EECCCHHHCCCHHHEEEEECCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA