| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447415
Identifier: 46447415
GI number: 46447415
Start: 2136361
End: 2136813
Strand: Direct
Name: 46447415
Synonym: pc1781
Alternate gene names: NA
Gene position: 2136361-2136813 (Clockwise)
Preceding gene: 46447414
Following gene: 46447417
Centisome position: 88.48
GC content: 30.68
Gene sequence:
>453_bases TTGCTTGGACTTATTCCAATGATTTATGTAGGAGGATTTGCCGAATTACCTTTTCTTCAAAAATGGGGAATTTGGGCTTT TTTAATAGGCTTTGGACTAATCACTGCTGGTTTAGTTCCGTATAAACAACTCATTTCTATTCAGCAAAAACCTGATGAAT TAAGACTTTCGGAAACAGATCAAATTGATTACTATCTAAAAGGAAAAAAAGTTTTAGGTTTACCAATTTCTTCTATTAAA CAAATTGAATATTATAATAAGGATCAAGATTTTGGAATCATTGTTAGACTCAAATTTCCTCTTGCTAATCCTTTTATTAT TTATAGCCATCCTTTTAGTTTGGTGAATTTCCAAAAGAAATCATTTTTGGTTGAAAAAGCAGATATTTTCTTTCCTTATT TCACTCAACGCTCTTTCGATGAGCTACAAACTTGGTTATTAACTGAGAGTTGA
Upstream 100 bases:
>100_bases GACAGATTAAAAGAAAGCCATGCATAACAATTTTGTTTTACGAACAGCAATTCCTGAAAAGTGGATAAAAAAAAGATTAT GGAAAGGAATTGTATGGAGT
Downstream 100 bases:
>100_bases AGTTTTTTGCAATAAATTTAGATTATAACCCTGTTTGAATAAGATCATGAATATGAAGCAAGCCAATTACTTGCTGTTCA AGGTTAAGCACAGGAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLGLIPMIYVGGFAELPFLQKWGIWAFLIGFGLITAGLVPYKQLISIQQKPDELRLSETDQIDYYLKGKKVLGLPISSIK QIEYYNKDQDFGIIVRLKFPLANPFIIYSHPFSLVNFQKKSFLVEKADIFFPYFTQRSFDELQTWLLTES
Sequences:
>Translated_150_residues MLGLIPMIYVGGFAELPFLQKWGIWAFLIGFGLITAGLVPYKQLISIQQKPDELRLSETDQIDYYLKGKKVLGLPISSIK QIEYYNKDQDFGIIVRLKFPLANPFIIYSHPFSLVNFQKKSFLVEKADIFFPYFTQRSFDELQTWLLTES >Mature_150_residues MLGLIPMIYVGGFAELPFLQKWGIWAFLIGFGLITAGLVPYKQLISIQQKPDELRLSETDQIDYYLKGKKVLGLPISSIK QIEYYNKDQDFGIIVRLKFPLANPFIIYSHPFSLVNFQKKSFLVEKADIFFPYFTQRSFDELQTWLLTES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17440; Mature: 17440
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLIPMIYVGGFAELPFLQKWGIWAFLIGFGLITAGLVPYKQLISIQQKPDELRLSETD CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC QIDYYLKGKKVLGLPISSIKQIEYYNKDQDFGIIVRLKFPLANPFIIYSHPFSLVNFQKK CEEEEEECCEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCHHEEEHHH SFLVEKADIFFPYFTQRSFDELQTWLLTES HHEEEHHHEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLGLIPMIYVGGFAELPFLQKWGIWAFLIGFGLITAGLVPYKQLISIQQKPDELRLSETD CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC QIDYYLKGKKVLGLPISSIKQIEYYNKDQDFGIIVRLKFPLANPFIIYSHPFSLVNFQKK CEEEEEECCEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCHHEEEHHH SFLVEKADIFFPYFTQRSFDELQTWLLTES HHEEEHHHEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA