| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447409
Identifier: 46447409
GI number: 46447409
Start: 2132904
End: 2133227
Strand: Direct
Name: 46447409
Synonym: pc1775
Alternate gene names: NA
Gene position: 2132904-2133227 (Clockwise)
Preceding gene: 46447407
Following gene: 46447410
Centisome position: 88.34
GC content: 33.33
Gene sequence:
>324_bases ATGTGGGGCATCTTCATGCCTCACACAAGCTCTATTGTTTGCTTGCACATTGTCTTTCTTATACTGTCAAAACAATCTCG CATCGCTCAAGGCGATCGCTATTCTTACGCGTTTTGTTTTTCAACGTTTATTGCGGAAGAGACTACTAACATACAAAATA TTCATGTTTTATCGCAACACACTTTTTATCTTTTTTGCCTTTTCGTTTTCAAAACATATTTTAAAGCTATTTTATTTTTT GATTGCTTTTCCAATTTTTGCAAACTCACTGAATTTTTGAGTAACGACAATAAGAAAGAAGAAAAAACTATTTCCTCTCA GTAG
Upstream 100 bases:
>100_bases CAGCATTCAATCTGAACCAAGATCAAATTCTCACAGAAAAATAAACTCTTGAAAACCTGAGTTGATTATATTAATCTGCA CTACTTAAATGTAGTGCTAT
Downstream 100 bases:
>100_bases TTTTGTTAGAACCCGTCAATGCTATTTACCCTATTCAGCTTTGCTTAGCATTTAGATTTGCGTGTCGGTTATATAATCCA ACCGCTTACGAGAGAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MWGIFMPHTSSIVCLHIVFLILSKQSRIAQGDRYSYAFCFSTFIAEETTNIQNIHVLSQHTFYLFCLFVFKTYFKAILFF DCFSNFCKLTEFLSNDNKKEEKTISSQ
Sequences:
>Translated_107_residues MWGIFMPHTSSIVCLHIVFLILSKQSRIAQGDRYSYAFCFSTFIAEETTNIQNIHVLSQHTFYLFCLFVFKTYFKAILFF DCFSNFCKLTEFLSNDNKKEEKTISSQ >Mature_107_residues MWGIFMPHTSSIVCLHIVFLILSKQSRIAQGDRYSYAFCFSTFIAEETTNIQNIHVLSQHTFYLFCLFVFKTYFKAILFF DCFSNFCKLTEFLSNDNKKEEKTISSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12612; Mature: 12612
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGIFMPHTSSIVCLHIVFLILSKQSRIAQGDRYSYAFCFSTFIAEETTNIQNIHVLSQH CCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH TFYLFCLFVFKTYFKAILFFDCFSNFCKLTEFLSNDNKKEEKTISSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure MWGIFMPHTSSIVCLHIVFLILSKQSRIAQGDRYSYAFCFSTFIAEETTNIQNIHVLSQH CCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH TFYLFCLFVFKTYFKAILFFDCFSNFCKLTEFLSNDNKKEEKTISSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA