Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447287

Identifier: 46447287

GI number: 46447287

Start: 1985382

End: 1985594

Strand: Direct

Name: 46447287

Synonym: pc1653

Alternate gene names: NA

Gene position: 1985382-1985594 (Clockwise)

Preceding gene: 46447285

Following gene: 46447288

Centisome position: 82.23

GC content: 32.39

Gene sequence:

>213_bases
ATGAGTACTAGCCGCTTTGTCTATTTAAAAAAGAAACTTTTTGTTTCTCTATTTGCTTATCTTTTGGACAAAAGAGGAGA
AATCACAGGAATTACTTTTATTGATTTTCCATCGATAGATGTTTGCCACAATAAACGCATAAAAAGAAACAAGATCTTTA
AAGATTTGGCAAAGAGGGAGAAAAACAACTTCAGGGTGGATTTTCGGGTTTAA

Upstream 100 bases:

>100_bases
GAATGACAATTGTTATTTTATTTCATCAATCAAATAATCGAACATTTAAGCCTTTTATGGGTATGTTACCAACTGCTTAG
GTAAAGAATTTCCAAACTTA

Downstream 100 bases:

>100_bases
ATTGCATCTCATGATCAATGAGAAAGGAGAAATTTTAGCTTTTCAGCTTAACTAGACATATTGCTGATGTCTCTATTGCC
GAAACCTTGTCGAAAGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSTSRFVYLKKKLFVSLFAYLLDKRGEITGITFIDFPSIDVCHNKRIKRNKIFKDLAKREKNNFRVDFRV

Sequences:

>Translated_70_residues
MSTSRFVYLKKKLFVSLFAYLLDKRGEITGITFIDFPSIDVCHNKRIKRNKIFKDLAKREKNNFRVDFRV
>Mature_69_residues
STSRFVYLKKKLFVSLFAYLLDKRGEITGITFIDFPSIDVCHNKRIKRNKIFKDLAKREKNNFRVDFRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8417; Mature: 8286

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSRFVYLKKKLFVSLFAYLLDKRGEITGITFIDFPSIDVCHNKRIKRNKIFKDLAKRE
CCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCC
KNNFRVDFRV
CCCEEEEEEC
>Mature Secondary Structure 
STSRFVYLKKKLFVSLFAYLLDKRGEITGITFIDFPSIDVCHNKRIKRNKIFKDLAKRE
CCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCC
KNNFRVDFRV
CCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA