| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is uvrA [H]
Identifier: 46447275
GI number: 46447275
Start: 1965994
End: 1971696
Strand: Direct
Name: uvrA [H]
Synonym: pc1641
Alternate gene names: 46447275
Gene position: 1965994-1971696 (Clockwise)
Preceding gene: 46447274
Following gene: 46447276
Centisome position: 81.43
GC content: 38.12
Gene sequence:
>5703_bases ATGATGAATCAGGAAAATATTGTCCTCAAAAAAGTGCGTGTTCATAATCTCAAAACAGTGGATCTGACTTTAGAAAAGAA TGAGCTCATCGTTTTTACTGGAGTATCGGGTTCAGGAAAATCTTCTTTAGCGTTTGATACCATTTATACTGAAGGGCAAA GGCGTTATGTAGAATCCCTTTCTACATTTGCAAGACGTCAATTAGGAGAATTGTCTAAACCCGATCTTGAACATGCAAGT GGAATTTCTCCTACAATTTCAATTGAACAAAAAACAGCTGGAAAAAACCCTCGATCAACCGTGGGGACGTTAACCGAAAT TTACGACTATTTACGAGTTCTTTATGCTCGAATCGGGATCCCTCATTGTCCTGTTAGCGGGGAAGCTGTAACCCCTCAAA GTCGAGAAAGAATTATAAAATCTGTCCAAAATCTTCCCCCCAAAACAAAAATTATTATTTTAGCTCCTTATGCAAAGGCA AAAAAAGCAGAGTTTAAAGAAGATTTTCAAGAGTTAATCCGCAAAGGTTTTATGCGAGCCAGAGTGGACGGACACTTTGT GAATTTAACGGATGAACTGACCTTAGATGGAAATGTGACTCACGATGTCGATGTTGTGATTGATCGATTGACAATTGAAA ATAATGCTCTATCACGAATTGCTGATTCGTTAACACAAGCTCTGCAACTTGGACAGGGTGTATGCAGCATATTAGACGCT GAATCAAAAAATGAGCAGCTTTTTTCTATGCATGCCTATTCCCCTCAATCAGGATTATCTTACTCTTCTTTAGAACCCCA TGACTTTTCATTTAATAGCCCTTCTGGTATGTGTCCTCGCTGTCAAGGAATGGGAAATATTCATGAATTCAATTTAGATC TCGTTATTGATCCTAACCTCAGCATCGCAAACAATTGTTGCTCTATTGCTAGTCCTTATCAAACAGTTCGTTATGGAAAT ATTTACGACAATCTAGCTGAACAATATCACTTTAGTGTAAATACACCCTGGAAAAACCTCTCTGCAAGTGCCCGTAAAGT TTATTTATTTGGAACAGAAAAAAAATGGACGCGTATGCATTTTGTTCATCCCATCACGGGAGCTCGCTGGACAGATCATA TTCAATGGAAAGGCGTTCTACACGACGCTCACACTCGATTTTCAGAAGCAAAAAGTGAAAATTACCGAAAGAAAATGCAA AAAGTCATGAGCATTCAAATTTGCCCTGAATGTGAAGGAACAAGGCTTAAACCTTACCCAGCTGCGACTTTATTAGGTGG TCAACGAATTAGCAAATTAACCTCAATGACTATTTTTGATTGCTCCGTTTTTTTTGAAAATTTAAAACTTTCACCACAAG ACAGTTTAATTGCAGGTGAACTTTTAAAAGAAATTCGACAAAGGCTACAATTTCTATTAGAAGTGGGACTTCATTACCTA ACTTTAGAACGGACCGCTCCTACCCTATCTGGAGGAGAAGCTCAACGCGTGCGGCTTGCCTCCCAAATTGGTTGTGGGTT AGTGGGAATTACTTATATTTTAGATGAGCCCTCCATTGGACTTCATCCTCGTGATAACCGAAAATTGATCGATACTTTAA AGCATCTTCGAGACATGGGAAATACTGTTATTGTTGTCGAACACGATGAAGAAACAATATGGGAAGCTGATCGCATTGTC GATTTCGGACCGGGGGCTGGTGTCAAAGGAGGTCGCATTCTTGTAAACGGAGACTTATCAGATCTTTTTAATCAATCTGA ATCTATAACAGGAGCTTATCTAACAGGCCGTAAACAAATTGATATTCCAAAAAAACGACGTAAAGCATCCAAAGATTTTT TAGAAATCAAAGGGGCTCAGCATCATAATCTCAAATCAATCGATGTTAAAATTCCTTTAGGTTTATTTGTAGCAGTGACG GGAGTTTCTGGATCCGGCAAATCTTCTTTAATTACCGATATTTTATATCCTGCTTTATCCAATGCACTTCATGGTGGAGA ACATGCAGTCGGAAATCACCAAATGATCCAAGGATTAGAAGCCATAGACAAAGTGATCGCTATTGATCAGTCTCCTATTG GACGTAATCCCCGTTCTAATCCAGCTACTTATATTAAACTATTTGATGAAATTCGAGATTTATTTAGCCAACTTCCAGAA AGTCAAGCGCGAGGTTATAAGGCTGGGAGATTTAGTTTTAATGTCAAAGATGGCTCTTGTTCACATTGTGAAGGGATGGG AATGATTAAAATTGACATGGATTTCATGGAAGATGCATGGGATGATTGCCCTCTTTGTAAAACAAAACGATTTGATTCAG AAACTCTTTCAGTTTTATATAAAGGGAAAAATATTCATGATATTTTAGAAATGGATGTGTGCGATGCCTTAGAATTTTTT ACAAATATTCCCTCTATTAAACATAAGCTTGAAACATTGAGCCAAGTTGGAATGGATTATATTAAGCTTGGGCAAGCTTC AACAACTCTTTCGGGAGGAGAAGCTCAACGTATCAAATTGGCTAAAGAACTTGTTAGACCAGCGACGGGTAAGACTTTAT ATATCTTAGATGAGCCTACGACAGGCCTCCATTTTCATGATATCAAACATCTTCTTGAAGTTCTACATGCTTTAGTCGAG AAAGGTAATACTGTTTTAGTGATCGAACACAACATGGATGTTGTCAAAACAGCTGACTGGATTATTGATTTAGGTCCAGA AGGAGGAGCTGGAGGAGGGCAAATTATTGCCACTGGAAATCCAGAAAAAATTGCTAAGATGAAAACTCCCACAGGAATAG CCGTTAATTATGCACTTTATCCTGAGATAGAAAAAAAAATAGCAACTGCTCTCGAGACAAGTAAAAAACGGCGCAAAACC AAAAAGCAAAGAGAGGCTCTCTTAATTAAAGACATCAATGTAATAGGTGCTGAACAAAACAATCTCAAACAAATTTCTGT GACTATCCCCCGTGAAAAAATTACTGTCTGCACAGGCCCTTCCGGATCTGGAAAATCTTCTTTAGCCTTTGAGACCATTT ATGCAGAAGGACAAAGGCGTTATATTGAATCTTTATCTCCTTACGCTCGTCAATTTGTCAAACAAATGCCAAAGCCTAAA GTGGGACAGGTAAGTGGTCTTTCGCCTGCTATTGCAATTGAACAAAAAGCTCATGCAGGAAATCCTCGTAGCACTGTTGG GACTTTGACAGAAATTTACGATTACTTACGCATCTTATTTTCAAGGTTGGGAATAGCACATTGCCCCGAAACAGGAGAAG TTATTAAATCCATTAGCAAAGAACTCGTTGTCGAACGTATTCTATCCTATCCCGAAAATCAACGATTACAAATTTTAGCC CCCATAGAATTAAATAAAAACGAGAAATTTGAAGATTTAATTCTTAAATTTAATCGACAAGGTTTTCTACGCATTCGATT AAATGGAGAATTTTACTCTCTGGAACAAGATCAAATAAATCAAATTCCTTTTGATCGAAAACGTAAAAACCAACTTTTCT TGGTCATCGATCGTTTAAAAACAAATTCATCCATCAAAGCTCGCTTATTTGAAGCCATTGAAAATGCGACTTCAATTGGA GATGGAAAAGTTGTTGTAATGAAAGAAGATGAAGATATTCCTTTTAACCTTTCTTTTGCTGTTGAAAGTACAGGTAAATC TTACCCTGAAATTACACCTCATACCTTTGCTTTCAATACTCATGAGGGAATGTGTGTGGATTGCCAAGGACTTGGTTACC AATATGGCGCTAACTTTGCGCGTAACACTGAAATGACATCTTATTCAGTTATTGGATTAATGCGACATCTCTGGCAGCAA GCATTCACTCGTCATGCTTTTGCTTATATGGAACACATTCTCGATGAAGAAGGGATTGATCCTCATGTTCCACTTAATCA ACTACCAATCGATAAAATCCAATTTCTAATGCAAGGTTCTTCGGAGGAACGCTGGTATACAAATGCGTCCGGACTTCGTT ACCGATGGATAGGAATTGATCAGGTTCTCGCAAAAGCTGGAAAAAACGCAGCATCAGAAAAAAAAGAAGCGATTATTCCC CTTTTACAAGAACAAACATGCATCTCTTGCCAAGGTGCAAGAATCAATCCGCTCGCAAGAAACGTCACCATTCACAATCA TTCTATTCATGACATTTGTTCAATGCCAATTGAACAAACTTTAAATTTCATTAAAAAGCTTAAACTTTGCCCACAAGATA AAAAACTTCTAGAAGAAGTTCACACACAACTTATCAATCGTTTAAGTTTTCTTTGTGAAGTAGGACTTCATTATTTATCT CTTGAACGTCGAGCCCCCACATTAAGCGGTGGAGAAGCACAAAGAATTCGATTGGCCCGCCAGTTAGGAAGCGGATTGAC GGGTGTTCTGTATGTTCTTGATGAACCAACCATTGGACTCCATCCTCATGATAATGCCAAATTAAATGCAGCATTAAAAA AACTTAAAGATCTTGGAAATACTTTACTCATGGTTGAACATGATCCGTTGACTATTGAAACAGCAGATTATCTTCTCGAT TTCGGCCCAGCCTCTGGAGAGCATGGGGGACATGTCACCGCAAGAGGAAGCTTTAAGCAAATTTTAAAAAGTACAACTTC TTTGACTGGAGCTTATCTGTCTGGTAAGAAAAAAATTCCTATTCTCTCCAGAAGACGCTCAATTGATCAGGAACAAATCG TTATTCAACACACAAAGAAAAATAATTTAAAATCTATTAGTGTTGAAATCCCTATAGCTGCTTTGACCTGTTTAACAGGG GTATCTGGTTCAGGTAAGTCTACGTTATTGCACCAAGTTTTGCTTCCCGCTCTTGAAAAAAGACAAAATCACGATATTGT CGAAATCGAAGGAGCCATAGTGTCTGGCTTATCACATTTTGATAAAGTGATTTCGATTGATCAAGATCCTATTGGAACAA CAGTTCGTTCAGACGTTTGCACCTACGTCGATGTTTTGACTCGCATTCGTGAGTTTTTTGTCTCTTTGCCAGCTGCTCGA ACAAAAGGACTTCAACCCAAAAATTTTAGTTATAATCATCGTAAAGGGATGTGCACAGGCTGCTGGGGACTGGGATATCG ACGAGTCGAAATGCATTTTCTTCCTGCAGTTAAAGTAACCTGTGAAGATTGCCAAGGATTAAGGTTAAATCCTATAAGTT TGGAAGTTACTTATGCAGGAAAAAATTTAGGACAATATCTTAATACAACGATCGATGAAGCACGGGTAATTTTTCAAAAT CATCCTCGAATTGTCAGAATTTTAGATACACTGATCGCTGTCGGACTTGGCTATTTAAAGCTAGGGCAAGAAACAGCTAG TTTATCGGGAGGAGAAGCACAAAGGTTAAAATTGAGTCGAGAATTAGCTAAAAGATCAACGGGACGTACCTTATATCTCC TCGATGAACCAACAACAGGCTTACACAGTGATGACATCTATAAACTTTTACAAGTTCTGCATCGTTTGGTTGATAAAGGG AATACGATGATTATCATTGAACATCATTTAGACATAATCAAAAATGCTGACTATATTATTGATTTAGGCCCAGAAGCTGG GGAAAAAGGTGGGAAAGTCTTGGGAAAAGGAACGCCCGAACAAATCGCTCAACTCTCTTCTTCCTGGACAGGACATTATT TAAAAAATGTATTATCAATTTGA
Upstream 100 bases:
>100_bases CTCAATCAATTAAAAATTACGAGCATTTTGTTTTTAAGAAATTTCAAAAGATCTCCCTCTTTATCTTACAATGATGAATT TCTAATCTTTTCAGGAATGA
Downstream 100 bases:
>100_bases TTCAAGTTACATAAATAATTGAAGTTTAAAGTTTGACTAAAAATTGAAGCAAAATGATATGATCAAATCCAAAATTTTAA GTTAATATTTTTAACAGTTA
Product: excinuclease ABC subunit A
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]
Number of amino acids: Translated: 1900; Mature: 1900
Protein sequence:
>1900_residues MMNQENIVLKKVRVHNLKTVDLTLEKNELIVFTGVSGSGKSSLAFDTIYTEGQRRYVESLSTFARRQLGELSKPDLEHAS GISPTISIEQKTAGKNPRSTVGTLTEIYDYLRVLYARIGIPHCPVSGEAVTPQSRERIIKSVQNLPPKTKIIILAPYAKA KKAEFKEDFQELIRKGFMRARVDGHFVNLTDELTLDGNVTHDVDVVIDRLTIENNALSRIADSLTQALQLGQGVCSILDA ESKNEQLFSMHAYSPQSGLSYSSLEPHDFSFNSPSGMCPRCQGMGNIHEFNLDLVIDPNLSIANNCCSIASPYQTVRYGN IYDNLAEQYHFSVNTPWKNLSASARKVYLFGTEKKWTRMHFVHPITGARWTDHIQWKGVLHDAHTRFSEAKSENYRKKMQ KVMSIQICPECEGTRLKPYPAATLLGGQRISKLTSMTIFDCSVFFENLKLSPQDSLIAGELLKEIRQRLQFLLEVGLHYL TLERTAPTLSGGEAQRVRLASQIGCGLVGITYILDEPSIGLHPRDNRKLIDTLKHLRDMGNTVIVVEHDEETIWEADRIV DFGPGAGVKGGRILVNGDLSDLFNQSESITGAYLTGRKQIDIPKKRRKASKDFLEIKGAQHHNLKSIDVKIPLGLFVAVT GVSGSGKSSLITDILYPALSNALHGGEHAVGNHQMIQGLEAIDKVIAIDQSPIGRNPRSNPATYIKLFDEIRDLFSQLPE SQARGYKAGRFSFNVKDGSCSHCEGMGMIKIDMDFMEDAWDDCPLCKTKRFDSETLSVLYKGKNIHDILEMDVCDALEFF TNIPSIKHKLETLSQVGMDYIKLGQASTTLSGGEAQRIKLAKELVRPATGKTLYILDEPTTGLHFHDIKHLLEVLHALVE KGNTVLVIEHNMDVVKTADWIIDLGPEGGAGGGQIIATGNPEKIAKMKTPTGIAVNYALYPEIEKKIATALETSKKRRKT KKQREALLIKDINVIGAEQNNLKQISVTIPREKITVCTGPSGSGKSSLAFETIYAEGQRRYIESLSPYARQFVKQMPKPK VGQVSGLSPAIAIEQKAHAGNPRSTVGTLTEIYDYLRILFSRLGIAHCPETGEVIKSISKELVVERILSYPENQRLQILA PIELNKNEKFEDLILKFNRQGFLRIRLNGEFYSLEQDQINQIPFDRKRKNQLFLVIDRLKTNSSIKARLFEAIENATSIG DGKVVVMKEDEDIPFNLSFAVESTGKSYPEITPHTFAFNTHEGMCVDCQGLGYQYGANFARNTEMTSYSVIGLMRHLWQQ AFTRHAFAYMEHILDEEGIDPHVPLNQLPIDKIQFLMQGSSEERWYTNASGLRYRWIGIDQVLAKAGKNAASEKKEAIIP LLQEQTCISCQGARINPLARNVTIHNHSIHDICSMPIEQTLNFIKKLKLCPQDKKLLEEVHTQLINRLSFLCEVGLHYLS LERRAPTLSGGEAQRIRLARQLGSGLTGVLYVLDEPTIGLHPHDNAKLNAALKKLKDLGNTLLMVEHDPLTIETADYLLD FGPASGEHGGHVTARGSFKQILKSTTSLTGAYLSGKKKIPILSRRRSIDQEQIVIQHTKKNNLKSISVEIPIAALTCLTG VSGSGKSTLLHQVLLPALEKRQNHDIVEIEGAIVSGLSHFDKVISIDQDPIGTTVRSDVCTYVDVLTRIREFFVSLPAAR TKGLQPKNFSYNHRKGMCTGCWGLGYRRVEMHFLPAVKVTCEDCQGLRLNPISLEVTYAGKNLGQYLNTTIDEARVIFQN HPRIVRILDTLIAVGLGYLKLGQETASLSGGEAQRLKLSRELAKRSTGRTLYLLDEPTTGLHSDDIYKLLQVLHRLVDKG NTMIIIEHHLDIIKNADYIIDLGPEAGEKGGKVLGKGTPEQIAQLSSSWTGHYLKNVLSI
Sequences:
>Translated_1900_residues MMNQENIVLKKVRVHNLKTVDLTLEKNELIVFTGVSGSGKSSLAFDTIYTEGQRRYVESLSTFARRQLGELSKPDLEHAS GISPTISIEQKTAGKNPRSTVGTLTEIYDYLRVLYARIGIPHCPVSGEAVTPQSRERIIKSVQNLPPKTKIIILAPYAKA KKAEFKEDFQELIRKGFMRARVDGHFVNLTDELTLDGNVTHDVDVVIDRLTIENNALSRIADSLTQALQLGQGVCSILDA ESKNEQLFSMHAYSPQSGLSYSSLEPHDFSFNSPSGMCPRCQGMGNIHEFNLDLVIDPNLSIANNCCSIASPYQTVRYGN IYDNLAEQYHFSVNTPWKNLSASARKVYLFGTEKKWTRMHFVHPITGARWTDHIQWKGVLHDAHTRFSEAKSENYRKKMQ KVMSIQICPECEGTRLKPYPAATLLGGQRISKLTSMTIFDCSVFFENLKLSPQDSLIAGELLKEIRQRLQFLLEVGLHYL TLERTAPTLSGGEAQRVRLASQIGCGLVGITYILDEPSIGLHPRDNRKLIDTLKHLRDMGNTVIVVEHDEETIWEADRIV DFGPGAGVKGGRILVNGDLSDLFNQSESITGAYLTGRKQIDIPKKRRKASKDFLEIKGAQHHNLKSIDVKIPLGLFVAVT GVSGSGKSSLITDILYPALSNALHGGEHAVGNHQMIQGLEAIDKVIAIDQSPIGRNPRSNPATYIKLFDEIRDLFSQLPE SQARGYKAGRFSFNVKDGSCSHCEGMGMIKIDMDFMEDAWDDCPLCKTKRFDSETLSVLYKGKNIHDILEMDVCDALEFF TNIPSIKHKLETLSQVGMDYIKLGQASTTLSGGEAQRIKLAKELVRPATGKTLYILDEPTTGLHFHDIKHLLEVLHALVE KGNTVLVIEHNMDVVKTADWIIDLGPEGGAGGGQIIATGNPEKIAKMKTPTGIAVNYALYPEIEKKIATALETSKKRRKT KKQREALLIKDINVIGAEQNNLKQISVTIPREKITVCTGPSGSGKSSLAFETIYAEGQRRYIESLSPYARQFVKQMPKPK VGQVSGLSPAIAIEQKAHAGNPRSTVGTLTEIYDYLRILFSRLGIAHCPETGEVIKSISKELVVERILSYPENQRLQILA PIELNKNEKFEDLILKFNRQGFLRIRLNGEFYSLEQDQINQIPFDRKRKNQLFLVIDRLKTNSSIKARLFEAIENATSIG DGKVVVMKEDEDIPFNLSFAVESTGKSYPEITPHTFAFNTHEGMCVDCQGLGYQYGANFARNTEMTSYSVIGLMRHLWQQ AFTRHAFAYMEHILDEEGIDPHVPLNQLPIDKIQFLMQGSSEERWYTNASGLRYRWIGIDQVLAKAGKNAASEKKEAIIP LLQEQTCISCQGARINPLARNVTIHNHSIHDICSMPIEQTLNFIKKLKLCPQDKKLLEEVHTQLINRLSFLCEVGLHYLS LERRAPTLSGGEAQRIRLARQLGSGLTGVLYVLDEPTIGLHPHDNAKLNAALKKLKDLGNTLLMVEHDPLTIETADYLLD FGPASGEHGGHVTARGSFKQILKSTTSLTGAYLSGKKKIPILSRRRSIDQEQIVIQHTKKNNLKSISVEIPIAALTCLTG VSGSGKSTLLHQVLLPALEKRQNHDIVEIEGAIVSGLSHFDKVISIDQDPIGTTVRSDVCTYVDVLTRIREFFVSLPAAR TKGLQPKNFSYNHRKGMCTGCWGLGYRRVEMHFLPAVKVTCEDCQGLRLNPISLEVTYAGKNLGQYLNTTIDEARVIFQN HPRIVRILDTLIAVGLGYLKLGQETASLSGGEAQRLKLSRELAKRSTGRTLYLLDEPTTGLHSDDIYKLLQVLHRLVDKG NTMIIIEHHLDIIKNADYIIDLGPEAGEKGGKVLGKGTPEQIAQLSSSWTGHYLKNVLSI >Mature_1900_residues MMNQENIVLKKVRVHNLKTVDLTLEKNELIVFTGVSGSGKSSLAFDTIYTEGQRRYVESLSTFARRQLGELSKPDLEHAS GISPTISIEQKTAGKNPRSTVGTLTEIYDYLRVLYARIGIPHCPVSGEAVTPQSRERIIKSVQNLPPKTKIIILAPYAKA KKAEFKEDFQELIRKGFMRARVDGHFVNLTDELTLDGNVTHDVDVVIDRLTIENNALSRIADSLTQALQLGQGVCSILDA ESKNEQLFSMHAYSPQSGLSYSSLEPHDFSFNSPSGMCPRCQGMGNIHEFNLDLVIDPNLSIANNCCSIASPYQTVRYGN IYDNLAEQYHFSVNTPWKNLSASARKVYLFGTEKKWTRMHFVHPITGARWTDHIQWKGVLHDAHTRFSEAKSENYRKKMQ KVMSIQICPECEGTRLKPYPAATLLGGQRISKLTSMTIFDCSVFFENLKLSPQDSLIAGELLKEIRQRLQFLLEVGLHYL TLERTAPTLSGGEAQRVRLASQIGCGLVGITYILDEPSIGLHPRDNRKLIDTLKHLRDMGNTVIVVEHDEETIWEADRIV DFGPGAGVKGGRILVNGDLSDLFNQSESITGAYLTGRKQIDIPKKRRKASKDFLEIKGAQHHNLKSIDVKIPLGLFVAVT GVSGSGKSSLITDILYPALSNALHGGEHAVGNHQMIQGLEAIDKVIAIDQSPIGRNPRSNPATYIKLFDEIRDLFSQLPE SQARGYKAGRFSFNVKDGSCSHCEGMGMIKIDMDFMEDAWDDCPLCKTKRFDSETLSVLYKGKNIHDILEMDVCDALEFF TNIPSIKHKLETLSQVGMDYIKLGQASTTLSGGEAQRIKLAKELVRPATGKTLYILDEPTTGLHFHDIKHLLEVLHALVE KGNTVLVIEHNMDVVKTADWIIDLGPEGGAGGGQIIATGNPEKIAKMKTPTGIAVNYALYPEIEKKIATALETSKKRRKT KKQREALLIKDINVIGAEQNNLKQISVTIPREKITVCTGPSGSGKSSLAFETIYAEGQRRYIESLSPYARQFVKQMPKPK VGQVSGLSPAIAIEQKAHAGNPRSTVGTLTEIYDYLRILFSRLGIAHCPETGEVIKSISKELVVERILSYPENQRLQILA PIELNKNEKFEDLILKFNRQGFLRIRLNGEFYSLEQDQINQIPFDRKRKNQLFLVIDRLKTNSSIKARLFEAIENATSIG DGKVVVMKEDEDIPFNLSFAVESTGKSYPEITPHTFAFNTHEGMCVDCQGLGYQYGANFARNTEMTSYSVIGLMRHLWQQ AFTRHAFAYMEHILDEEGIDPHVPLNQLPIDKIQFLMQGSSEERWYTNASGLRYRWIGIDQVLAKAGKNAASEKKEAIIP LLQEQTCISCQGARINPLARNVTIHNHSIHDICSMPIEQTLNFIKKLKLCPQDKKLLEEVHTQLINRLSFLCEVGLHYLS LERRAPTLSGGEAQRIRLARQLGSGLTGVLYVLDEPTIGLHPHDNAKLNAALKKLKDLGNTLLMVEHDPLTIETADYLLD FGPASGEHGGHVTARGSFKQILKSTTSLTGAYLSGKKKIPILSRRRSIDQEQIVIQHTKKNNLKSISVEIPIAALTCLTG VSGSGKSTLLHQVLLPALEKRQNHDIVEIEGAIVSGLSHFDKVISIDQDPIGTTVRSDVCTYVDVLTRIREFFVSLPAAR TKGLQPKNFSYNHRKGMCTGCWGLGYRRVEMHFLPAVKVTCEDCQGLRLNPISLEVTYAGKNLGQYLNTTIDEARVIFQN HPRIVRILDTLIAVGLGYLKLGQETASLSGGEAQRLKLSRELAKRSTGRTLYLLDEPTTGLHSDDIYKLLQVLHRLVDKG NTMIIIEHHLDIIKNADYIIDLGPEAGEKGGKVLGKGTPEQIAQLSSSWTGHYLKNVLSI
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI2367343, Length=927, Percent_Identity=49.2988133764833, Blast_Score=903, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR013815 - InterPro: IPR004602 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 211643; Mature: 211643
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNQENIVLKKVRVHNLKTVDLTLEKNELIVFTGVSGSGKSSLAFDTIYTEGQRRYVESL CCCCCCEEEEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHH STFARRQLGELSKPDLEHASGISPTISIEQKTAGKNPRSTVGTLTEIYDYLRVLYARIGI HHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PHCPVSGEAVTPQSRERIIKSVQNLPPKTKIIILAPYAKAKKAEFKEDFQELIRKGFMRA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHE RVDGHFVNLTDELTLDGNVTHDVDVVIDRLTIENNALSRIADSLTQALQLGQGVCSILDA ECCCEEEEEEEEEEECCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC ESKNEQLFSMHAYSPQSGLSYSSLEPHDFSFNSPSGMCPRCQGMGNIHEFNLDLVIDPNL CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC SIANNCCSIASPYQTVRYGNIYDNLAEQYHFSVNTPWKNLSASARKVYLFGTEKKWTRMH CHHHCCCCCCCCHHHEECCCHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCEEEEE FVHPITGARWTDHIQWKGVLHDAHTRFSEAKSENYRKKMQKVMSIQICPECEGTRLKPYP EECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC AATLLGGQRISKLTSMTIFDCSVFFENLKLSPQDSLIAGELLKEIRQRLQFLLEVGLHYL CHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHEE TLERTAPTLSGGEAQRVRLASQIGCGLVGITYILDEPSIGLHPRDNRKLIDTLKHLRDMG EEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC NTVIVVEHDEETIWEADRIVDFGPGAGVKGGRILVNGDLSDLFNQSESITGAYLTGRKQI CEEEEEECCCHHHHHHHCEEEECCCCCCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCC DIPKKRRKASKDFLEIKGAQHHNLKSIDVKIPLGLFVAVTGVSGSGKSSLITDILYPALS CCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHH NALHGGEHAVGNHQMIQGLEAIDKVIAIDQSPIGRNPRSNPATYIKLFDEIRDLFSQLPE HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH SQARGYKAGRFSFNVKDGSCSHCEGMGMIKIDMDFMEDAWDDCPLCKTKRFDSETLSVLY HHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHEEE KGKNIHDILEMDVCDALEFFTNIPSIKHKLETLSQVGMDYIKLGQASTTLSGGEAQRIKL CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHH AKELVRPATGKTLYILDEPTTGLHFHDIKHLLEVLHALVEKGNTVLVIEHNMDVVKTADW HHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCE IIDLGPEGGAGGGQIIATGNPEKIAKMKTPTGIAVNYALYPEIEKKIATALETSKKRRKT EEEECCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH KKQREALLIKDINVIGAEQNNLKQISVTIPREKITVCTGPSGSGKSSLAFETIYAEGQRR HHHHHEEEEEECEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEHHHHHHHHHH YIESLSPYARQFVKQMPKPKVGQVSGLSPAIAIEQKAHAGNPRSTVGTLTEIYDYLRILF HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHCCCCCCHHHHHHHHHHHHHHHHH SRLGIAHCPETGEVIKSISKELVVERILSYPENQRLQILAPIELNKNEKFEDLILKFNRQ HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCC GFLRIRLNGEFYSLEQDQINQIPFDRKRKNQLFLVIDRLKTNSSIKARLFEAIENATSIG CEEEEEECCCEEECCHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC DGKVVVMKEDEDIPFNLSFAVESTGKSYPEITPHTFAFNTHEGMCVDCQGLGYQYGANFA CCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCHHCCCCC RNTEMTSYSVIGLMRHLWQQAFTRHAFAYMEHILDEEGIDPHVPLNQLPIDKIQFLMQGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC SEERWYTNASGLRYRWIGIDQVLAKAGKNAASEKKEAIIPLLQEQTCISCQGARINPLAR CCCCEEECCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHC NVTIHNHSIHDICSMPIEQTLNFIKKLKLCPQDKKLLEEVHTQLINRLSFLCEVGLHYLS EEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LERRAPTLSGGEAQRIRLARQLGSGLTGVLYVLDEPTIGLHPHDNAKLNAALKKLKDLGN HHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC TLLMVEHDPLTIETADYLLDFGPASGEHGGHVTARGSFKQILKSTTSLTGAYLSGKKKIP EEEEEECCCCEEEHHHHHEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCC ILSRRRSIDQEQIVIQHTKKNNLKSISVEIPIAALTCLTGVSGSGKSTLLHQVLLPALEK HHHHHHCCCHHHEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RQNHDIVEIEGAIVSGLSHFDKVISIDQDPIGTTVRSDVCTYVDVLTRIREFFVSLPAAR HCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH TKGLQPKNFSYNHRKGMCTGCWGLGYRRVEMHFLPAVKVTCEDCQGLRLNPISLEVTYAG HCCCCCCCCCCCCCCCCEEEEHHCCEEEEEEEECCCEEEECCCCCCCEECCEEEEEEECC KNLGQYLNTTIDEARVIFQNHPRIVRILDTLIAVGLGYLKLGQETASLSGGEAQRLKLSR CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHH ELAKRSTGRTLYLLDEPTTGLHSDDIYKLLQVLHRLVDKGNTMIIIEHHLDIIKNADYII HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCEEE DLGPEAGEKGGKVLGKGTPEQIAQLSSSWTGHYLKNVLSI ECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MMNQENIVLKKVRVHNLKTVDLTLEKNELIVFTGVSGSGKSSLAFDTIYTEGQRRYVESL CCCCCCEEEEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHH STFARRQLGELSKPDLEHASGISPTISIEQKTAGKNPRSTVGTLTEIYDYLRVLYARIGI HHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PHCPVSGEAVTPQSRERIIKSVQNLPPKTKIIILAPYAKAKKAEFKEDFQELIRKGFMRA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHE RVDGHFVNLTDELTLDGNVTHDVDVVIDRLTIENNALSRIADSLTQALQLGQGVCSILDA ECCCEEEEEEEEEEECCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC ESKNEQLFSMHAYSPQSGLSYSSLEPHDFSFNSPSGMCPRCQGMGNIHEFNLDLVIDPNL CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC SIANNCCSIASPYQTVRYGNIYDNLAEQYHFSVNTPWKNLSASARKVYLFGTEKKWTRMH CHHHCCCCCCCCHHHEECCCHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCEEEEE FVHPITGARWTDHIQWKGVLHDAHTRFSEAKSENYRKKMQKVMSIQICPECEGTRLKPYP EECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC AATLLGGQRISKLTSMTIFDCSVFFENLKLSPQDSLIAGELLKEIRQRLQFLLEVGLHYL CHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHEE TLERTAPTLSGGEAQRVRLASQIGCGLVGITYILDEPSIGLHPRDNRKLIDTLKHLRDMG EEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC NTVIVVEHDEETIWEADRIVDFGPGAGVKGGRILVNGDLSDLFNQSESITGAYLTGRKQI CEEEEEECCCHHHHHHHCEEEECCCCCCCCCEEEEECCHHHHCCCCCCCCEEEEECCCCC DIPKKRRKASKDFLEIKGAQHHNLKSIDVKIPLGLFVAVTGVSGSGKSSLITDILYPALS CCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHH NALHGGEHAVGNHQMIQGLEAIDKVIAIDQSPIGRNPRSNPATYIKLFDEIRDLFSQLPE HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH SQARGYKAGRFSFNVKDGSCSHCEGMGMIKIDMDFMEDAWDDCPLCKTKRFDSETLSVLY HHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHEEE KGKNIHDILEMDVCDALEFFTNIPSIKHKLETLSQVGMDYIKLGQASTTLSGGEAQRIKL CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHH AKELVRPATGKTLYILDEPTTGLHFHDIKHLLEVLHALVEKGNTVLVIEHNMDVVKTADW HHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCE IIDLGPEGGAGGGQIIATGNPEKIAKMKTPTGIAVNYALYPEIEKKIATALETSKKRRKT EEEECCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHH KKQREALLIKDINVIGAEQNNLKQISVTIPREKITVCTGPSGSGKSSLAFETIYAEGQRR HHHHHEEEEEECEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEHHHHHHHHHH YIESLSPYARQFVKQMPKPKVGQVSGLSPAIAIEQKAHAGNPRSTVGTLTEIYDYLRILF HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHCCCCCCHHHHHHHHHHHHHHHHH SRLGIAHCPETGEVIKSISKELVVERILSYPENQRLQILAPIELNKNEKFEDLILKFNRQ HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCC GFLRIRLNGEFYSLEQDQINQIPFDRKRKNQLFLVIDRLKTNSSIKARLFEAIENATSIG CEEEEEECCCEEECCHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC DGKVVVMKEDEDIPFNLSFAVESTGKSYPEITPHTFAFNTHEGMCVDCQGLGYQYGANFA CCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCHHCCCCC RNTEMTSYSVIGLMRHLWQQAFTRHAFAYMEHILDEEGIDPHVPLNQLPIDKIQFLMQGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC SEERWYTNASGLRYRWIGIDQVLAKAGKNAASEKKEAIIPLLQEQTCISCQGARINPLAR CCCCEEECCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHC NVTIHNHSIHDICSMPIEQTLNFIKKLKLCPQDKKLLEEVHTQLINRLSFLCEVGLHYLS EEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LERRAPTLSGGEAQRIRLARQLGSGLTGVLYVLDEPTIGLHPHDNAKLNAALKKLKDLGN HHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC TLLMVEHDPLTIETADYLLDFGPASGEHGGHVTARGSFKQILKSTTSLTGAYLSGKKKIP EEEEEECCCCEEEHHHHHEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCC ILSRRRSIDQEQIVIQHTKKNNLKSISVEIPIAALTCLTGVSGSGKSTLLHQVLLPALEK HHHHHHCCCHHHEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RQNHDIVEIEGAIVSGLSHFDKVISIDQDPIGTTVRSDVCTYVDVLTRIREFFVSLPAAR HCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH TKGLQPKNFSYNHRKGMCTGCWGLGYRRVEMHFLPAVKVTCEDCQGLRLNPISLEVTYAG HCCCCCCCCCCCCCCCCEEEEHHCCEEEEEEEECCCEEEECCCCCCCEECCEEEEEEECC KNLGQYLNTTIDEARVIFQNHPRIVRILDTLIAVGLGYLKLGQETASLSGGEAQRLKLSR CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHH ELAKRSTGRTLYLLDEPTTGLHSDDIYKLLQVLHRLVDKGNTMIIIEHHLDIIKNADYII HHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCEEE DLGPEAGEKGGKVLGKGTPEQIAQLSSSWTGHYLKNVLSI ECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]