Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447271

Identifier: 46447271

GI number: 46447271

Start: 1958934

End: 1959386

Strand: Direct

Name: 46447271

Synonym: pc1637

Alternate gene names: NA

Gene position: 1958934-1959386 (Clockwise)

Preceding gene: 46447268

Following gene: 46447274

Centisome position: 81.13

GC content: 34.44

Gene sequence:

>453_bases
ATGTGGATGGAAATAGAATCAAACTATACGTTTAATAGACCTTTGGCTAGCTCCCTTTCAGGGAAACCTATACTCAGTGC
AGCATCAAGAAAGCGTTATCAAAGAGAAAGATTTCTTGCTGTAAAAGTTGGTTCTGATACCATGGTTCCGTTTTATTCCC
AAGGGACATTCAATACGGATTTGTTTAATCTATGGCTAGAACAATTTTTAATTCCAGAATTAAGACCTAGCCAAGCTGGG
ATTTTGGACAATGCAACATTTCATCAATCTCAAAAAACAAAAGATTTAATTCAATCCGCTGGGTATCAAGTGCTTTTCTT
GATGCCCTATTCACCCGACTTAAATCCAATAGAATTATTCTGGGCTAATTTAAAAAGAACGATTAGCGAAAATTTAAAAA
AATTTACTTCCTTATCTGAAGCGATCGATTATTCATTTTTAGCATACTCATAA

Upstream 100 bases:

>100_bases
ATGTGCAGCTTGAATCCCCTGAACTTTTGATACATCTTTTGAAACTAAATTTCTTGTTTTTTCTAAAAAATAGAAAATAG
GCTACTAAAAAATCGTTTTT

Downstream 100 bases:

>100_bases
CAAAAAATATAATTTTTAATTTAACCCCCTCTTTATTAACGATTTTTTAAACACTTTCAAGTTGTGTTAATATTCAAAAT
AATGCGAGAGAAACATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Transposase; ISSpo6 Transposase OrfB; Transposase And Inactivated Derivatives-Like Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; ISHde6 Transposase OrfB; ISHde5 Transposase OrfA; Transposase Family Protein; Transposase Of Insertion Sequence; Insertion Sequence Transposase Protein; Transposase And Inactivated Derivative

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTDLFNLWLEQFLIPELRPSQAG
ILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELFWANLKRTISENLKKFTSLSEAIDYSFLAYS

Sequences:

>Translated_150_residues
MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTDLFNLWLEQFLIPELRPSQAG
ILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELFWANLKRTISENLKKFTSLSEAIDYSFLAYS
>Mature_150_residues
MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTDLFNLWLEQFLIPELRPSQAG
ILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELFWANLKRTISENLKKFTSLSEAIDYSFLAYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17294; Mature: 17294

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTD
CEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCHH
LFNLWLEQFLIPELRPSQAGILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELF
HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHH
WANLKRTISENLKKFTSLSEAIDYSFLAYS
HHHHHHHHHHHHHHHHHHHHHHCCHHEECC
>Mature Secondary Structure
MWMEIESNYTFNRPLASSLSGKPILSAASRKRYQRERFLAVKVGSDTMVPFYSQGTFNTD
CEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCHH
LFNLWLEQFLIPELRPSQAGILDNATFHQSQKTKDLIQSAGYQVLFLMPYSPDLNPIELF
HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHH
WANLKRTISENLKKFTSLSEAIDYSFLAYS
HHHHHHHHHHHHHHHHHHHHHHCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA