Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447123

Identifier: 46447123

GI number: 46447123

Start: 1772902

End: 1773855

Strand: Direct

Name: 46447123

Synonym: pc1489

Alternate gene names: NA

Gene position: 1772902-1773855 (Clockwise)

Preceding gene: 161611303

Following gene: 46447124

Centisome position: 73.43

GC content: 38.78

Gene sequence:

>954_bases
ATGCGAAAGTTGATAACCTTCTTAATGACGTTATTAGTAGGATCTTCAGTATCTTACGCCAACGCCGATTTTGGACAACT
AACCTTTGAAGTTGGATATCGTCATGATGACATTAGCTGGAACCAAAAAGCTCCATCTTATAATCCAAACTATAAACTCC
ACAGAAAATTTAAAGACCTCGACATCGTTCAAATTGGTTTGAAAGGAAGAACAATGTTAGGTTACAACTTCTACGGTCGC
GCTTCTGTAAATTGGGGCTGGATCGTTGACGGTGATTACAAAAGAACATTTTCTACTTACAAAAGCCCAGTTATTGCTGG
TTTTGGTTCAGAAGATTTCGTTGTAACAGATACACGTAGAGATGTTATCGATGAAAACTTTGTTTATGATCTAAGCATTG
GTGTTGGATATCCATTCTATTTTAGTGATTGCACATTAGCATTATCACCAGTAGTTGGTTATGCACTAGATTCACAACAT
ATTTCTGTTGAGCAGGGTGGCTTAGGATTTGATTCAACTGGTGCTGTTAATCCTAACAGCTACGGAAGCTACACACACAA
ATTTAACAGCCGTTGGTATGGACCTTTTGTTGGAGTTGATTTCAATTACCGCCCATACGGCGAAACTTGGAATCTTTATG
CTGAAGTAGAGTACCATTTTGCTCGTTTCAAAGGTAGATACCATGATGAGCTACTTAGCCAACACCATATACATCGTTCT
AAACATGCTCATGCATGGACATTTGCATTGGGTGCGGATTATGACTTTTCTAACGACTGGACAGCTGGACTTTGCGTAAA
ATTCCAAGACTGGACAGCTTCTAGACGTCATGGCCACCATGGTCACGTAAGCAGCAACTCAAGTGATGAAATCATTAACC
TAAGTGGAAATGAAAGAACTTCACACAAATGGAATTCATATGCTATTAACTTGACATTTGGAAAACAATTCTAA

Upstream 100 bases:

>100_bases
TAAACTAATCATAAAAGCCTGTTACTTGCTCCGCAAGTCTGGCAAAACAAAGCCAACATTTTGAATTTAAGGTAAACTTA
AACGTTAACAAGGAAAAAAT

Downstream 100 bases:

>100_bases
TTTCCTTGTCTAGTTGAAATCATATTCACAAATACCTAAGGTAACTTAAAACTTACCTTAGGTATTTTTTTGTCTATGTA
AATCCTATTAACTTTTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRKLITFLMTLLVGSSVSYANADFGQLTFEVGYRHDDISWNQKAPSYNPNYKLHRKFKDLDIVQIGLKGRTMLGYNFYGR
ASVNWGWIVDGDYKRTFSTYKSPVIAGFGSEDFVVTDTRRDVIDENFVYDLSIGVGYPFYFSDCTLALSPVVGYALDSQH
ISVEQGGLGFDSTGAVNPNSYGSYTHKFNSRWYGPFVGVDFNYRPYGETWNLYAEVEYHFARFKGRYHDELLSQHHIHRS
KHAHAWTFALGADYDFSNDWTAGLCVKFQDWTASRRHGHHGHVSSNSSDEIINLSGNERTSHKWNSYAINLTFGKQF

Sequences:

>Translated_317_residues
MRKLITFLMTLLVGSSVSYANADFGQLTFEVGYRHDDISWNQKAPSYNPNYKLHRKFKDLDIVQIGLKGRTMLGYNFYGR
ASVNWGWIVDGDYKRTFSTYKSPVIAGFGSEDFVVTDTRRDVIDENFVYDLSIGVGYPFYFSDCTLALSPVVGYALDSQH
ISVEQGGLGFDSTGAVNPNSYGSYTHKFNSRWYGPFVGVDFNYRPYGETWNLYAEVEYHFARFKGRYHDELLSQHHIHRS
KHAHAWTFALGADYDFSNDWTAGLCVKFQDWTASRRHGHHGHVSSNSSDEIINLSGNERTSHKWNSYAINLTFGKQF
>Mature_317_residues
MRKLITFLMTLLVGSSVSYANADFGQLTFEVGYRHDDISWNQKAPSYNPNYKLHRKFKDLDIVQIGLKGRTMLGYNFYGR
ASVNWGWIVDGDYKRTFSTYKSPVIAGFGSEDFVVTDTRRDVIDENFVYDLSIGVGYPFYFSDCTLALSPVVGYALDSQH
ISVEQGGLGFDSTGAVNPNSYGSYTHKFNSRWYGPFVGVDFNYRPYGETWNLYAEVEYHFARFKGRYHDELLSQHHIHRS
KHAHAWTFALGADYDFSNDWTAGLCVKFQDWTASRRHGHHGHVSSNSSDEIINLSGNERTSHKWNSYAINLTFGKQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36325; Mature: 36325

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLITFLMTLLVGSSVSYANADFGQLTFEVGYRHDDISWNQKAPSYNPNYKLHRKFKDL
CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCEEEECCCC
DIVQIGLKGRTMLGYNFYGRASVNWGWIVDGDYKRTFSTYKSPVIAGFGSEDFVVTDTRR
EEEEECCCCCEEEEEEEEEEEECCCEEEEECCHHHHHHHHCCCEEEECCCCCEEEECCHH
DVIDENFVYDLSIGVGYPFYFSDCTLALSPVVGYALDSQHISVEQGGLGFDSTGAVNPNS
HHCCCCEEEEEEECCCCCEEECCCCEEEHHHHHEEECCCEEEEECCCCCCCCCCCCCCCC
YGSYTHKFNSRWYGPFVGVDFNYRPYGETWNLYAEVEYHFARFKGRYHDELLSQHHIHRS
CCCEEEECCCEECCCEEECCCCCCCCCCCEEEEEEEEEEEEHHCCCHHHHHHHHHHHHHC
KHAHAWTFALGADYDFSNDWTAGLCVKFQDWTASRRHGHHGHVSSNSSDEIINLSGNERT
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
SHKWNSYAINLTFGKQF
CCCCCEEEEEEEECCCC
>Mature Secondary Structure
MRKLITFLMTLLVGSSVSYANADFGQLTFEVGYRHDDISWNQKAPSYNPNYKLHRKFKDL
CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCEEEECCCC
DIVQIGLKGRTMLGYNFYGRASVNWGWIVDGDYKRTFSTYKSPVIAGFGSEDFVVTDTRR
EEEEECCCCCEEEEEEEEEEEECCCEEEEECCHHHHHHHHCCCEEEECCCCCEEEECCHH
DVIDENFVYDLSIGVGYPFYFSDCTLALSPVVGYALDSQHISVEQGGLGFDSTGAVNPNS
HHCCCCEEEEEEECCCCCEEECCCCEEEHHHHHEEECCCEEEEECCCCCCCCCCCCCCCC
YGSYTHKFNSRWYGPFVGVDFNYRPYGETWNLYAEVEYHFARFKGRYHDELLSQHHIHRS
CCCEEEECCCEECCCEEECCCCCCCCCCCEEEEEEEEEEEEHHCCCHHHHHHHHHHHHHC
KHAHAWTFALGADYDFSNDWTAGLCVKFQDWTASRRHGHHGHVSSNSSDEIINLSGNERT
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
SHKWNSYAINLTFGKQF
CCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA