| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is tpx
Identifier: 46446968
GI number: 46446968
Start: 1592469
End: 1592756
Strand: Direct
Name: tpx
Synonym: pc1334
Alternate gene names: NA
Gene position: 1592469-1592756 (Clockwise)
Preceding gene: 46446967
Following gene: 46446969
Centisome position: 65.96
GC content: 32.99
Gene sequence:
>288_bases TTGCCCTTTATCCCCCTAATTGAAGTCCTGCTCTGCAACAATCAATTAACGTTATATAATGAAGTTATAGAGAAATTTAA ACGGTTTAAAGCACAATTTGTTGAAATTTCTGTCGCGGAAATTTGTTCCCATTTAGCTTTTTTCCACCAAAAAAAATTAG GTTTTCCATTATTGTCAGATTTTGAGCCAAAAAAAGAGATATTCAAGGCGTATGGAGTATTTCGAAATGAAGAAGGAGTA TCTAAGAGAGCTCTTTTTGTCATCAATGGAAAAGGAATTATTCTCTGA
Upstream 100 bases:
>100_bases GGTTGCTCTAAAAGCTGGAACAAAAGTGCCTTCCTTAACTCCTTACAGGGCCTAATTACTTACTACCTCTTTATGAATTT GCAGAAAACTTCTTAAATCT
Downstream 100 bases:
>100_bases AGCGATGTTTCTCCGATCGATATTAAACCAGGAACTGAGGAAATCTTAAAATCTTAAAAAAATTGTCTATCAAAGGAGAT CATTGATGCCTCAATTATCT
Product: putative thioredoxin peroxidase
Products: NA
Alternate protein names: 1-Cysteine Peroxiredoxin; Peroxiredoxin; AhpC/TSA Family Protein
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MPFIPLIEVLLCNNQLTLYNEVIEKFKRFKAQFVEISVAEICSHLAFFHQKKLGFPLLSDFEPKKEIFKAYGVFRNEEGV SKRALFVINGKGIIL
Sequences:
>Translated_95_residues MPFIPLIEVLLCNNQLTLYNEVIEKFKRFKAQFVEISVAEICSHLAFFHQKKLGFPLLSDFEPKKEIFKAYGVFRNEEGV SKRALFVINGKGIIL >Mature_94_residues PFIPLIEVLLCNNQLTLYNEVIEKFKRFKAQFVEISVAEICSHLAFFHQKKLGFPLLSDFEPKKEIFKAYGVFRNEEGVS KRALFVINGKGIIL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10993; Mature: 10862
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIPLIEVLLCNNQLTLYNEVIEKFKRFKAQFVEISVAEICSHLAFFHQKKLGFPLLSD CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FEPKKEIFKAYGVFRNEEGVSKRALFVINGKGIIL CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEC >Mature Secondary Structure PFIPLIEVLLCNNQLTLYNEVIEKFKRFKAQFVEISVAEICSHLAFFHQKKLGFPLLSD CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FEPKKEIFKAYGVFRNEEGVSKRALFVINGKGIIL CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA