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The map label for this gene is dpm1 [H]

Identifier: 46446944

GI number: 46446944

Start: 1567142

End: 1567783

Strand: Direct

Name: dpm1 [H]

Synonym: pc1310

Alternate gene names: 46446944

Gene position: 1567142-1567783 (Clockwise)

Preceding gene: 46446943

Following gene: 46446945

Centisome position: 64.91

GC content: 33.49

Gene sequence:

>642_bases
ATGAATCAACTTAGGGAAACTTGGGAATTGATTTGTATTGATGATGGTTCAACAGACAATACAAAGGCTATTTTAAAAAA
ATTAAACGAAGAAAAAGGTTATTTACGATCTATTTTTTTTAAGAAAAATTATGGGCAATCCAGTGCTTTTGAGGCAGGGT
TCAAAGCAGCTCAAGGAAAATTTATCATTACGCTAGATGGAGATAGGCAAAATGATCCAACAGATATACCTAAACTGATT
AAAGAAATTAACACTTGTGACCTCGTCTGCGGGATTCGTCTTAACCGTAAAGACTCTTGGAGCAAACGGATGATTTCCAA
AGGAGCTAATTTTGTCAGAAGTCGCCTTTGTGGGGATGGAATGCGAGATACGGGTTGTTCATTAAAAGTTTATCGAGCTT
CCTGTTTTCAAAAAATTAAAATGTACAATGGAATGCATCGTTTTTTACCGGCATTATTTAAAATTGAAGGATTTGAGATT
AAACAAATCCCTGTTAATCATCGAGAACGTTTAAAAGGAAAAAGCAATTACAACTTTTTTAATCGTTCTTTAAATACTGT
TTCTGATTTGTTAGCTGTCTGTTGGATGAGAAAAAGACACCTTCATTACCAAATTGAAGATGATTTCTCACCAAAAAATT
AA

Upstream 100 bases:

>100_bases
TAAGAGATTTTATTTAATGTCTGTTTACTATTCCGTTGTCATTCCTTTAAAAAATGAAGAGAGCAATATTGAGGAACTCA
TTCAAGAATTAGAACCTGTC

Downstream 100 bases:

>100_bases
AAAGGGATTTTGTGGAAGATTGGAGAACATTTTTATATCCTCTTGGGTTTTTATCTTCGATAGCTTTTGGAGCACGTTTT
ATTGTCCAATGGCTCCAGAG

Product: putative dolichol-phosphate mannosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNQLRETWELICIDDGSTDNTKAILKKLNEEKGYLRSIFFKKNYGQSSAFEAGFKAAQGKFIITLDGDRQNDPTDIPKLI
KEINTCDLVCGIRLNRKDSWSKRMISKGANFVRSRLCGDGMRDTGCSLKVYRASCFQKIKMYNGMHRFLPALFKIEGFEI
KQIPVNHRERLKGKSNYNFFNRSLNTVSDLLAVCWMRKRHLHYQIEDDFSPKN

Sequences:

>Translated_213_residues
MNQLRETWELICIDDGSTDNTKAILKKLNEEKGYLRSIFFKKNYGQSSAFEAGFKAAQGKFIITLDGDRQNDPTDIPKLI
KEINTCDLVCGIRLNRKDSWSKRMISKGANFVRSRLCGDGMRDTGCSLKVYRASCFQKIKMYNGMHRFLPALFKIEGFEI
KQIPVNHRERLKGKSNYNFFNRSLNTVSDLLAVCWMRKRHLHYQIEDDFSPKN
>Mature_213_residues
MNQLRETWELICIDDGSTDNTKAILKKLNEEKGYLRSIFFKKNYGQSSAFEAGFKAAQGKFIITLDGDRQNDPTDIPKLI
KEINTCDLVCGIRLNRKDSWSKRMISKGANFVRSRLCGDGMRDTGCSLKVYRASCFQKIKMYNGMHRFLPALFKIEGFEI
KQIPVNHRERLKGKSNYNFFNRSLNTVSDLLAVCWMRKRHLHYQIEDDFSPKN

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=184, Percent_Identity=29.8913043478261, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI1788588, Length=190, Percent_Identity=38.4210526315789, Blast_Score=131, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71999402, Length=190, Percent_Identity=30, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585265, Length=185, Percent_Identity=28.6486486486486, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 24751; Mature: 24751

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLRETWELICIDDGSTDNTKAILKKLNEEKGYLRSIFFKKNYGQSSAFEAGFKAAQGK
CCCHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
FIITLDGDRQNDPTDIPKLIKEINTCDLVCGIRLNRKDSWSKRMISKGANFVRSRLCGDG
EEEEECCCCCCCCCHHHHHHHHCCCCCEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCC
MRDTGCSLKVYRASCFQKIKMYNGMHRFLPALFKIEGFEIKQIPVNHRERLKGKSNYNFF
CCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCHHH
NRSLNTVSDLLAVCWMRKRHLHYQIEDDFSPKN
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure
MNQLRETWELICIDDGSTDNTKAILKKLNEEKGYLRSIFFKKNYGQSSAFEAGFKAAQGK
CCCHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
FIITLDGDRQNDPTDIPKLIKEINTCDLVCGIRLNRKDSWSKRMISKGANFVRSRLCGDG
EEEEECCCCCCCCCHHHHHHHHCCCCCEEECEEECCCCHHHHHHHHHHHHHHHHHHHCCC
MRDTGCSLKVYRASCFQKIKMYNGMHRFLPALFKIEGFEIKQIPVNHRERLKGKSNYNFF
CCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCHHH
NRSLNTVSDLLAVCWMRKRHLHYQIEDDFSPKN
HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA