Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446910

Identifier: 46446910

GI number: 46446910

Start: 1527642

End: 1529645

Strand: Direct

Name: 46446910

Synonym: pc1276

Alternate gene names: NA

Gene position: 1527642-1529645 (Clockwise)

Preceding gene: 46446909

Following gene: 46446912

Centisome position: 63.27

GC content: 38.52

Gene sequence:

>2004_bases
TTGTGCAAAACAATTTTTCAGTCCTTTCTCAACTTATTCTTTAATTATCTCGAAAAAGAGCAGCTTCAGTCTCAATGGAG
AGAGATTTCTTGGGGACGAAAAGAAATTACGATTCCCAAATTTATTGCAAGTCGCCTCGCATCAATTGATAAATTTGAGG
ATGAAAACGAGCTTTTATTAAATTCTTTAGCTAACCCAGAAGGATTAAATGCTTTAAAGAACACTTCCCCCAAAAAAATA
AAATCATCCATAACTCCACAATCTTCGGATCTTTTCTCTTCATCCCAGGAATTTAAACTGAGATTTCAGGATGAAACTTC
GCTAAACATCTCGTATTCTCAACTAGCTTTGTTAAGGGAAGAATCGCCCTATTTTAAAAGTCTTTGGTCGGGAAATTTTC
GAGAAACCCTTCAAAATCCTCTTGCTTTAACGCAAACAGAGTTTACTCATCTGCTCGATTGCCTGGAATATTCTATTTCT
TTTGTTCCTTTGGAAGATATCCTTTCTTTCATTCAACTAGCCGATTATTATCAACTGTCAGAAGCTGGGAAAAAATTAGA
AAAACAGCTGATCGATGCGTATAAATCCCAAAAATTGGAACCGTTTAACTCTACCACAGATAGTTTAGTGGAATTAAAAG
CACTTTTAAATTTTGCGCAGCAATACCAACTAAATACTTTAAAAAATTATTTAGAACTTATAGTTGTGAGTTCTTTATTA
AACCAAGCTTCTCATGTAACCGAATTTGAAAAAATTTTAAAGCACTTCTCAAATGAAATAGAAAGACTCAATTTTTCAAA
GAACATCTTTTTGACTGATGCCCATCTGTTAGCGTTAAAAAATTGTAAAAATTTAAAAGCACTACATCTCCAGGAATGCG
ACAAACTTACCGACGCAGGATTAGCCCATTTAGCATCCTTGATGGCTTTGCAGCATTTAAATCTGAACGGATGCTGGGAA
CTCACCGACGCAGGATTAGCCCATTTAGCATCCTTGATGGCTTTGCAGCATTTAAATCTGGCTAAGTGCCATAAAATCAC
CGACGCAGGATTAGCCCATTTGACATCTTTGGTGGCTTTACAGCATTTAGATCTGAGCTGTTGTAGAAATCTTACTGACG
CTGGATTAACGCATTTGAGACCTTTAGTGGCTTTAACGCATTTAAATCTGGCTAAGTGCCATAAAATCACCGACGCAGGA
TTAGCCCATTTGACATCTTTGGTGGCTTTACAGCATTTAGACCTAAGCTATTGCGAAAAACTTACTGACGCTGGATTAGC
CCATTTGACACCTTTAGTGGCTTTACAGCATTTAGATCTGAGTTACAGCCACCATTTTACGAATGCAGGATTAGCCCATT
TGACATCTTTGGTGGCTTTACAGCATTTGAATTTGAATAGCTGCTATAAATTCACTGATGCTGGATTAGCCCATTTGACA
TCTTTGGTGGCTTTGCAGCATTTAGACCTAAGCTGTTGCAGAAATCTTACTGACGCTGGATTAGCCCATTTGGCACCTTT
AGTGGCTTTACAGCATTTAGATCTGAGTTACAGCCACCATTTTACGAATGCAGGATTAGCCCATTTGACATCTTTGGTGG
CTTTGCAGCATTTAGACCTAAGCTGTTGCAGAAATCTTACTGACGCTGGATTAGCCCATTTGACATCTTTGGTAGCTTTA
CAGCACTTAGATCTAAGTTCGTGCAAAAAACTCACGGATGCTGGATTAGAGCATTTGACACCTTTAGTGGCTTTACAGCA
TTTGGATCTGAGTTCGTGCAAAAAACTCACGGATGCTGGATTAGCGCATTTGGCACCTTTAGTGGCTTTACAGCATTTGG
ATCTGAGTTCGTGCAAAAAACTCACGGATGCTGGATTAGCCCATTTGGCACCTTTAGTGGCTTTGCAGCATTTAAATTTG
AATTGGTGCGATAAGCTTACCGACGCTGGAGTGGCGCATTTTAAATCCTCAGTAGCTCCCCTCCATTTAAAAATTATTTA
TTAA

Upstream 100 bases:

>100_bases
TAATCCAAGAGTTAATCCTAGTGATTTCGTTGTCAATACAGACACTCATTCTTACTATCAATCGAACTATCGTTTAAAAT
TTTCTGAACGAATTCATTTA

Downstream 100 bases:

>100_bases
AGCAACTCTTAATGACGTTAAATACAAAAATATTATAGGTTTTTTTAAATTAAATTTTCATAGTTCTCACAAAATAATTA
AAAAAAGAAAGTTCAATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MCKTIFQSFLNLFFNYLEKEQLQSQWREISWGRKEITIPKFIASRLASIDKFEDENELLLNSLANPEGLNALKNTSPKKI
KSSITPQSSDLFSSSQEFKLRFQDETSLNISYSQLALLREESPYFKSLWSGNFRETLQNPLALTQTEFTHLLDCLEYSIS
FVPLEDILSFIQLADYYQLSEAGKKLEKQLIDAYKSQKLEPFNSTTDSLVELKALLNFAQQYQLNTLKNYLELIVVSSLL
NQASHVTEFEKILKHFSNEIERLNFSKNIFLTDAHLLALKNCKNLKALHLQECDKLTDAGLAHLASLMALQHLNLNGCWE
LTDAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAG
LAHLTSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLNSCYKFTDAGLAHLT
SLVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLTSLVAL
QHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNL
NWCDKLTDAGVAHFKSSVAPLHLKIIY

Sequences:

>Translated_667_residues
MCKTIFQSFLNLFFNYLEKEQLQSQWREISWGRKEITIPKFIASRLASIDKFEDENELLLNSLANPEGLNALKNTSPKKI
KSSITPQSSDLFSSSQEFKLRFQDETSLNISYSQLALLREESPYFKSLWSGNFRETLQNPLALTQTEFTHLLDCLEYSIS
FVPLEDILSFIQLADYYQLSEAGKKLEKQLIDAYKSQKLEPFNSTTDSLVELKALLNFAQQYQLNTLKNYLELIVVSSLL
NQASHVTEFEKILKHFSNEIERLNFSKNIFLTDAHLLALKNCKNLKALHLQECDKLTDAGLAHLASLMALQHLNLNGCWE
LTDAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAG
LAHLTSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLNSCYKFTDAGLAHLT
SLVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLTSLVAL
QHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNL
NWCDKLTDAGVAHFKSSVAPLHLKIIY
>Mature_667_residues
MCKTIFQSFLNLFFNYLEKEQLQSQWREISWGRKEITIPKFIASRLASIDKFEDENELLLNSLANPEGLNALKNTSPKKI
KSSITPQSSDLFSSSQEFKLRFQDETSLNISYSQLALLREESPYFKSLWSGNFRETLQNPLALTQTEFTHLLDCLEYSIS
FVPLEDILSFIQLADYYQLSEAGKKLEKQLIDAYKSQKLEPFNSTTDSLVELKALLNFAQQYQLNTLKNYLELIVVSSLL
NQASHVTEFEKILKHFSNEIERLNFSKNIFLTDAHLLALKNCKNLKALHLQECDKLTDAGLAHLASLMALQHLNLNGCWE
LTDAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAG
LAHLTSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLNSCYKFTDAGLAHLT
SLVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLTSLVAL
QHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNL
NWCDKLTDAGVAHFKSSVAPLHLKIIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=309, Percent_Identity=35.2750809061489, Blast_Score=147, Evalue=5e-35,
Organism=Homo sapiens, GI161333852, Length=500, Percent_Identity=25.6, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI284447308, Length=332, Percent_Identity=32.8313253012048, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI161333854, Length=464, Percent_Identity=25.4310344827586, Blast_Score=109, Evalue=1e-23,
Organism=Homo sapiens, GI6912466, Length=286, Percent_Identity=31.1188811188811, Blast_Score=107, Evalue=5e-23,
Organism=Homo sapiens, GI27734755, Length=334, Percent_Identity=31.437125748503, Blast_Score=106, Evalue=8e-23,
Organism=Homo sapiens, GI296531375, Length=287, Percent_Identity=31.0104529616725, Blast_Score=95, Evalue=3e-19,
Organism=Homo sapiens, GI284447314, Length=266, Percent_Identity=32.7067669172932, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI289666746, Length=248, Percent_Identity=33.8709677419355, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI16306588, Length=300, Percent_Identity=29.6666666666667, Blast_Score=70, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI25151694, Length=331, Percent_Identity=29.0030211480363, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25151696, Length=331, Percent_Identity=29.0030211480363, Blast_Score=97, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6322549, Length=409, Percent_Identity=26.4058679706601, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17647819, Length=285, Percent_Identity=35.7894736842105, Blast_Score=141, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24662818, Length=260, Percent_Identity=35, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21357913, Length=290, Percent_Identity=32.0689655172414, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24652783, Length=313, Percent_Identity=30.9904153354633, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161076545, Length=313, Percent_Identity=30.9904153354633, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161076549, Length=313, Percent_Identity=30.9904153354633, Blast_Score=93, Evalue=7e-19,
Organism=Drosophila melanogaster, GI161076547, Length=313, Percent_Identity=30.9904153354633, Blast_Score=93, Evalue=7e-19,
Organism=Drosophila melanogaster, GI19921840, Length=355, Percent_Identity=25.9154929577465, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24646754, Length=239, Percent_Identity=30.5439330543933, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74016; Mature: 74016

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKTIFQSFLNLFFNYLEKEQLQSQWREISWGRKEITIPKFIASRLASIDKFEDENELLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
NSLANPEGLNALKNTSPKKIKSSITPQSSDLFSSSQEFKLRFQDETSLNISYSQLALLRE
HHCCCCCCCCHHHCCCHHHHHHCCCCCCHHHHCCCCHHEEEECCCCCCCCHHHHHHHHHC
ESPYFKSLWSGNFRETLQNPLALTQTEFTHLLDCLEYSISFVPLEDILSFIQLADYYQLS
CCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EAGKKLEKQLIDAYKSQKLEPFNSTTDSLVELKALLNFAQQYQLNTLKNYLELIVVSSLL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQASHVTEFEKILKHFSNEIERLNFSKNIFLTDAHLLALKNCKNLKALHLQECDKLTDAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAHLASLMALQHLNLNGCWELTDAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVAL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
QHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAGLAHLTSLVALQHLDLSYCEK
HHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLNSCYKFTDAGLAHLT
HHHCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLDL
HHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCH
SCCRNLTDAGLAHLTSLVALQHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAG
HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNLNWCDKLTDAGVAHFKSSVAP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
LHLKIIY
EEEEEEC
>Mature Secondary Structure
MCKTIFQSFLNLFFNYLEKEQLQSQWREISWGRKEITIPKFIASRLASIDKFEDENELLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
NSLANPEGLNALKNTSPKKIKSSITPQSSDLFSSSQEFKLRFQDETSLNISYSQLALLRE
HHCCCCCCCCHHHCCCHHHHHHCCCCCCHHHHCCCCHHEEEECCCCCCCCHHHHHHHHHC
ESPYFKSLWSGNFRETLQNPLALTQTEFTHLLDCLEYSISFVPLEDILSFIQLADYYQLS
CCHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
EAGKKLEKQLIDAYKSQKLEPFNSTTDSLVELKALLNFAQQYQLNTLKNYLELIVVSSLL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQASHVTEFEKILKHFSNEIERLNFSKNIFLTDAHLLALKNCKNLKALHLQECDKLTDAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAHLASLMALQHLNLNGCWELTDAGLAHLASLMALQHLNLAKCHKITDAGLAHLTSLVAL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
QHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAGLAHLTSLVALQHLDLSYCEK
HHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLNLNSCYKFTDAGLAHLT
HHHCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLVALQHLDLSCCRNLTDAGLAHLAPLVALQHLDLSYSHHFTNAGLAHLTSLVALQHLDL
HHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCH
SCCRNLTDAGLAHLTSLVALQHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAG
HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAHLAPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLNLNWCDKLTDAGVAHFKSSVAP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
LHLKIIY
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA