| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446895
Identifier: 46446895
GI number: 46446895
Start: 1505354
End: 1505800
Strand: Direct
Name: 46446895
Synonym: pc1261
Alternate gene names: NA
Gene position: 1505354-1505800 (Clockwise)
Preceding gene: 46446893
Following gene: 46446896
Centisome position: 62.35
GC content: 38.48
Gene sequence:
>447_bases ATGTTAAAAATCATTAAAGAAGAAAATCCGTGGTATGCAGAAGGATTATCGTTTGAATGCACTGGGTGCGGTCAATGCTG TACAGGTGCTCCTGGATATATTTGGGTCAATGAAGAAGAAATCGAACAAATCGCTTTTCATTTACATTTATCCATTCAAG AATTTGCAGATCATTATTTACGCTCTATTAATGGGCGTTTTTCACTGCTTGAGAGGCCACAAACTTATGATTGTGTATTT CTAAAAGATAAAAAATGCCAAATTTATTCCGTCCGTCCTACCCAATGTCGTACCTACCCTTGGTGGCCCCAAAACCTGAA AACAAAAAGAGATTGGAAAGAAGCTGCTAAATGGTGTGAAGGAATTTCGGAAACAGCTCCTGTTGTCTCCGTAGATAAAA TTCATGAGCAATTACAGAGACAACTGCGTGAAAATAACCAGCCATGA
Upstream 100 bases:
>100_bases TCGAAGCCGCTGTTGTTTTAGAATTGTTTGTATTATCTTTCTCATTTTATTTTTTTTTGCAGGTATTCGACAAATGGTTA AAAAGAAAGGCTTTTAAACT
Downstream 100 bases:
>100_bases CAAATAAAGTTTTAGCTATTGGATCTGGTAAAGAGGTGATGGATAAATCAACAGTCGCTGTCAACTTAGCTGTCGCTTTT TACAATTAGGCCCTAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MLKIIKEENPWYAEGLSFECTGCGQCCTGAPGYIWVNEEEIEQIAFHLHLSIQEFADHYLRSINGRFSLLERPQTYDCVF LKDKKCQIYSVRPTQCRTYPWWPQNLKTKRDWKEAAKWCEGISETAPVVSVDKIHEQLQRQLRENNQP
Sequences:
>Translated_148_residues MLKIIKEENPWYAEGLSFECTGCGQCCTGAPGYIWVNEEEIEQIAFHLHLSIQEFADHYLRSINGRFSLLERPQTYDCVF LKDKKCQIYSVRPTQCRTYPWWPQNLKTKRDWKEAAKWCEGISETAPVVSVDKIHEQLQRQLRENNQP >Mature_148_residues MLKIIKEENPWYAEGLSFECTGCGQCCTGAPGYIWVNEEEIEQIAFHLHLSIQEFADHYLRSINGRFSLLERPQTYDCVF LKDKKCQIYSVRPTQCRTYPWWPQNLKTKRDWKEAAKWCEGISETAPVVSVDKIHEQLQRQLRENNQP
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0661 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 17455; Mature: 17455
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIIKEENPWYAEGLSFECTGCGQCCTGAPGYIWVNEEEIEQIAFHLHLSIQEFADHYL CCEEEECCCCCEECCCCEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH RSINGRFSLLERPQTYDCVFLKDKKCQIYSVRPTQCRTYPWWPQNLKTKRDWKEAAKWCE HHCCCCEEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC GISETAPVVSVDKIHEQLQRQLRENNQP CCCCCCCEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLKIIKEENPWYAEGLSFECTGCGQCCTGAPGYIWVNEEEIEQIAFHLHLSIQEFADHYL CCEEEECCCCCEECCCCEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH RSINGRFSLLERPQTYDCVFLKDKKCQIYSVRPTQCRTYPWWPQNLKTKRDWKEAAKWCE HHCCCCEEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC GISETAPVVSVDKIHEQLQRQLRENNQP CCCCCCCEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]