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The map label for this gene is rsmI [H]

Identifier: 46446891

GI number: 46446891

Start: 1499957

End: 1500772

Strand: Direct

Name: rsmI [H]

Synonym: pc1257

Alternate gene names: 46446891

Gene position: 1499957-1500772 (Clockwise)

Preceding gene: 46446890

Following gene: 46446892

Centisome position: 62.12

GC content: 37.01

Gene sequence:

>816_bases
ATGTTATATCTAGTTGCGACTCCCATCGGGCATTTATCAGACATAACTTTTAGAGCTATTGAGACACTTAAATTCTGTGA
TTATATCTTATGTGAAGACACAAGGCATAGTCTTAGACTTCTTCAACATTACGATATACACAAACCTCTTAAAAGTTATC
ATAAGTTTAACGAAACCGAAAAGTCTCAATCAATTTTAGATGATCTCCATGCTGGTAAAAATATTTGTTTGATCTCGGAT
GCAGGCACACCAGGAATTTCTGATCCAGGAACACAATTAGTCCAACTTTGCATATCCAATCAAATTCCTGTCACAGCGAT
TCCAGGTCCATGCGCAGCGATCCAAGCTTTAAGTTGTTCAGGACTTCCAACAGACCATTTTCAATTTATTGGCTTTCTTC
CCCGCAAAGAAGGAGAGCTAAAAAAATTTCTACTTTCACTTTTTACCTATACAGGGACAACTATCTGCTATGAATCTCCT
CATCGTTTAATCGATACTTTAAAACTGTTCCACAGTTTACAACCTCATAGACAATTAGTTGTGGCAAGAGAATTGACAAA
AAAGTTTGAAGAATTTGTCAGAGGAACAGCAGAAGAAATCTTCAAGAAATGGAAAGATAAAGAGCCACGTGGTGAAATTG
TCTTGATGATCGAACCTTTTTCTCAAACACAAGTCGATTGGAATCAATGGTCTCCCGAAGAGCATGTTTCTTGGATGCAA
GCGACATATTCACTTTCTCGAAAAGAAGCCATAAAAATGGTGGCCGATTTGCGTCAAGTATCTAAAAGAGATATCTACAA
TCTTTTTCACAATTGA

Upstream 100 bases:

>100_bases
GTTCGAATCTGGGTGCCACCTAATTATTTCTAATATCTTTGCTCTATTTCTCCTTCGTATCCCTTTTTTAAACGTTCATT
AAAATTAGAAAAATTGTTGT

Downstream 100 bases:

>100_bases
CAATTCAAGCTTGAGGTATTTTTAATCCTCGCATAAATTATTATTTAGTTCTATGGACTATAAACAACTCTTCAAAATAT
CCTCCTTTTATTATATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLYLVATPIGHLSDITFRAIETLKFCDYILCEDTRHSLRLLQHYDIHKPLKSYHKFNETEKSQSILDDLHAGKNICLISD
AGTPGISDPGTQLVQLCISNQIPVTAIPGPCAAIQALSCSGLPTDHFQFIGFLPRKEGELKKFLLSLFTYTGTTICYESP
HRLIDTLKLFHSLQPHRQLVVARELTKKFEEFVRGTAEEIFKKWKDKEPRGEIVLMIEPFSQTQVDWNQWSPEEHVSWMQ
ATYSLSRKEAIKMVADLRQVSKRDIYNLFHN

Sequences:

>Translated_271_residues
MLYLVATPIGHLSDITFRAIETLKFCDYILCEDTRHSLRLLQHYDIHKPLKSYHKFNETEKSQSILDDLHAGKNICLISD
AGTPGISDPGTQLVQLCISNQIPVTAIPGPCAAIQALSCSGLPTDHFQFIGFLPRKEGELKKFLLSLFTYTGTTICYESP
HRLIDTLKLFHSLQPHRQLVVARELTKKFEEFVRGTAEEIFKKWKDKEPRGEIVLMIEPFSQTQVDWNQWSPEEHVSWMQ
ATYSLSRKEAIKMVADLRQVSKRDIYNLFHN
>Mature_271_residues
MLYLVATPIGHLSDITFRAIETLKFCDYILCEDTRHSLRLLQHYDIHKPLKSYHKFNETEKSQSILDDLHAGKNICLISD
AGTPGISDPGTQLVQLCISNQIPVTAIPGPCAAIQALSCSGLPTDHFQFIGFLPRKEGELKKFLLSLFTYTGTTICYESP
HRLIDTLKLFHSLQPHRQLVVARELTKKFEEFVRGTAEEIFKKWKDKEPRGEIVLMIEPFSQTQVDWNQWSPEEHVSWMQ
ATYSLSRKEAIKMVADLRQVSKRDIYNLFHN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=228, Percent_Identity=45.6140350877193, Blast_Score=188, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31162; Mature: 31162

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLVATPIGHLSDITFRAIETLKFCDYILCEDTRHSLRLLQHYDIHKPLKSYHKFNETE
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCHHH
KSQSILDDLHAGKNICLISDAGTPGISDPGTQLVQLCISNQIPVTAIPGPCAAIQALSCS
HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCC
GLPTDHFQFIGFLPRKEGELKKFLLSLFTYTGTTICYESPHRLIDTLKLFHSLQPHRQLV
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCHHHHHH
VARELTKKFEEFVRGTAEEIFKKWKDKEPRGEIVLMIEPFSQTQVDWNQWSPEEHVSWMQ
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
ATYSLSRKEAIKMVADLRQVSKRDIYNLFHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLYLVATPIGHLSDITFRAIETLKFCDYILCEDTRHSLRLLQHYDIHKPLKSYHKFNETE
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCHHH
KSQSILDDLHAGKNICLISDAGTPGISDPGTQLVQLCISNQIPVTAIPGPCAAIQALSCS
HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCC
GLPTDHFQFIGFLPRKEGELKKFLLSLFTYTGTTICYESPHRLIDTLKLFHSLQPHRQLV
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCHHHHHH
VARELTKKFEEFVRGTAEEIFKKWKDKEPRGEIVLMIEPFSQTQVDWNQWSPEEHVSWMQ
HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
ATYSLSRKEAIKMVADLRQVSKRDIYNLFHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]