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The map label for this gene is yjcR [C]

Identifier: 46446852

GI number: 46446852

Start: 1448740

End: 1449804

Strand: Direct

Name: yjcR [C]

Synonym: pc1218

Alternate gene names: 46446852

Gene position: 1448740-1449804 (Clockwise)

Preceding gene: 46446851

Following gene: 46446853

Centisome position: 60.0

GC content: 36.34

Gene sequence:

>1065_bases
ATGAAACGATCTTACTTTTTTATTATTTGTGCTTTGAGCATAGCTTCCCTATTTTTAATTGTTTTTTCCATGTGGAAAGA
ATCTCACCCCAAAGAAGCCCTTAAGGTTTTAAACATCAAAAGACCCGTGTCTCCTTTTAGTTCTTACATTGCTGCTGTAG
GAGTTGTCGAAGCTGGTAGCGAAAATATTTTTATTGGAACCCCCATCAATCGAATTGTAGATAAAATTTTTGTGACTGTC
GGCAATGAAGTGCATCAAGGCGATCCGCTCATTCAATTTGAAAATCGCGATTTAGAAGCCAACTTAAAAATACAAGAATT
AGCTTATCAAATCGCTCAAGCTCATGTTCAAAAATTAGAATCTTTTCCAAGAAAAGAAGATCTTCAATCTGCTGAAGCCT
CATTAAAAAAAGCTGACATTGAGTACCTTCTTGCTAAAAACCAATATGAAATGACGCGTGGAATGCAAGATAGTCGCGCA
TTAAGCCAAGAAGAAATGAACCGTCGTCTGTTTCGTTATCAAGAGGCTGAAGTTAATAAAAATCAAATGCAAGCAAATAT
GGAGAAAATCCAAGCCGGAACCTGGCTACCGGATCTAAAAATCGCGCAACTAGAGGCCCTTCAAACGAAAGCTCGCATGA
ATGCTGCCAAAATAGATATAGAGAGAACACTTCTTCGCTCACCAATCATTGGTAGAATTTTGCAAATCAACATTCATGAA
GGAGAATATGCTGGGCAAGATAGCTCTAAAATGCCTATGATTGTCCTTGGTAACACCAATGAAAAACATTTAGAGGTAAG
CATTAACCAATTTAATGCCCCCTATTTTAAATCAGATGCCCCAGCAGTTGCCTTTTTGCAAGGGGATTCTAATATCAAAT
TTCAACTTGAGTTCATCAAATTCGAACCTTATTTGGTTAACAAACAAAATTTTACTAATAACCTAACGGAAAAAGTGGAT
AGTAAAGTGTTAAAAGTGACTTACCGCTTTAAGGAAAATGATCAAAATATTTTTGTTGGACAGGTGATGGATGTTTTTAT
TCAAGCTGAATACCCTTGGAAATAA

Upstream 100 bases:

>100_bases
CAAAAGCTATTTTAGTCGTCACTCATGATCATCGCATATTTTCATTTGCGGATAGAGTTGTTGAAATGAGTGATGGACAA
ATCTTATCATCTGGAAAAAT

Downstream 100 bases:

>100_bases
GAAATGCGGATTAACTTTTTTTCTTTTTTAATTTTTACAAGTTTATTAACGAGTTGCTGTTCTCATAGAAGCTATGTTCC
ACCTTCACTTGATATCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Secretion Protein HlyD; Efflux Transporter RND Family MFP Subunit; Membrane-Fusion Protein; Export System Membrane Fusion Protein; Auxiliary Transport Protein Membrane Fusion Protein Family

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKRSYFFIICALSIASLFLIVFSMWKESHPKEALKVLNIKRPVSPFSSYIAAVGVVEAGSENIFIGTPINRIVDKIFVTV
GNEVHQGDPLIQFENRDLEANLKIQELAYQIAQAHVQKLESFPRKEDLQSAEASLKKADIEYLLAKNQYEMTRGMQDSRA
LSQEEMNRRLFRYQEAEVNKNQMQANMEKIQAGTWLPDLKIAQLEALQTKARMNAAKIDIERTLLRSPIIGRILQINIHE
GEYAGQDSSKMPMIVLGNTNEKHLEVSINQFNAPYFKSDAPAVAFLQGDSNIKFQLEFIKFEPYLVNKQNFTNNLTEKVD
SKVLKVTYRFKENDQNIFVGQVMDVFIQAEYPWK

Sequences:

>Translated_354_residues
MKRSYFFIICALSIASLFLIVFSMWKESHPKEALKVLNIKRPVSPFSSYIAAVGVVEAGSENIFIGTPINRIVDKIFVTV
GNEVHQGDPLIQFENRDLEANLKIQELAYQIAQAHVQKLESFPRKEDLQSAEASLKKADIEYLLAKNQYEMTRGMQDSRA
LSQEEMNRRLFRYQEAEVNKNQMQANMEKIQAGTWLPDLKIAQLEALQTKARMNAAKIDIERTLLRSPIIGRILQINIHE
GEYAGQDSSKMPMIVLGNTNEKHLEVSINQFNAPYFKSDAPAVAFLQGDSNIKFQLEFIKFEPYLVNKQNFTNNLTEKVD
SKVLKVTYRFKENDQNIFVGQVMDVFIQAEYPWK
>Mature_354_residues
MKRSYFFIICALSIASLFLIVFSMWKESHPKEALKVLNIKRPVSPFSSYIAAVGVVEAGSENIFIGTPINRIVDKIFVTV
GNEVHQGDPLIQFENRDLEANLKIQELAYQIAQAHVQKLESFPRKEDLQSAEASLKKADIEYLLAKNQYEMTRGMQDSRA
LSQEEMNRRLFRYQEAEVNKNQMQANMEKIQAGTWLPDLKIAQLEALQTKARMNAAKIDIERTLLRSPIIGRILQINIHE
GEYAGQDSSKMPMIVLGNTNEKHLEVSINQFNAPYFKSDAPAVAFLQGDSNIKFQLEFIKFEPYLVNKQNFTNNLTEKVD
SKVLKVTYRFKENDQNIFVGQVMDVFIQAEYPWK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40652; Mature: 40652

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSYFFIICALSIASLFLIVFSMWKESHPKEALKVLNIKRPVSPFSSYIAAVGVVEAGS
CCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHEECCC
ENIFIGTPINRIVDKIFVTVGNEVHQGDPLIQFENRDLEANLKIQELAYQIAQAHVQKLE
CCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
SFPRKEDLQSAEASLKKADIEYLLAKNQYEMTRGMQDSRALSQEEMNRRLFRYQEAEVNK
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH
NQMQANMEKIQAGTWLPDLKIAQLEALQTKARMNAAKIDIERTLLRSPIIGRILQINIHE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCEEEEEEEEC
GEYAGQDSSKMPMIVLGNTNEKHLEVSINQFNAPYFKSDAPAVAFLQGDSNIKFQLEFIK
CCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEE
FEPYLVNKQNFTNNLTEKVDSKVLKVTYRFKENDQNIFVGQVMDVFIQAEYPWK
ECCEEECCCCCCHHHHHHHCCCEEEEEEEEECCCCCEEHHHHHEEHEECCCCCC
>Mature Secondary Structure
MKRSYFFIICALSIASLFLIVFSMWKESHPKEALKVLNIKRPVSPFSSYIAAVGVVEAGS
CCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHEECCC
ENIFIGTPINRIVDKIFVTVGNEVHQGDPLIQFENRDLEANLKIQELAYQIAQAHVQKLE
CCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
SFPRKEDLQSAEASLKKADIEYLLAKNQYEMTRGMQDSRALSQEEMNRRLFRYQEAEVNK
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH
NQMQANMEKIQAGTWLPDLKIAQLEALQTKARMNAAKIDIERTLLRSPIIGRILQINIHE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCEEEEEEEEC
GEYAGQDSSKMPMIVLGNTNEKHLEVSINQFNAPYFKSDAPAVAFLQGDSNIKFQLEFIK
CCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEEE
FEPYLVNKQNFTNNLTEKVDSKVLKVTYRFKENDQNIFVGQVMDVFIQAEYPWK
ECCEEECCCCCCHHHHHHHCCCEEEEEEEEECCCCCEEHHHHHEEHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA