Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446846

Identifier: 46446846

GI number: 46446846

Start: 1443308

End: 1444417

Strand: Direct

Name: 46446846

Synonym: pc1212

Alternate gene names: NA

Gene position: 1443308-1444417 (Clockwise)

Preceding gene: 46446845

Following gene: 46446847

Centisome position: 59.78

GC content: 35.77

Gene sequence:

>1110_bases
ATGCAAGTGTATCCAACCACATCTGTTTCTTCAGAAATTCATCATCATGTCCAAAAACAAGGCTTGAAGCATAAATTATC
TTCAACCACTGAAAAAATTATTCAACTTAATCCAAAACTACTCTTAGGTGAGTCTAATTTATTCAACTATGACTTGGCAA
ATCACGCCATTGTGTTAGCACCCCAGTTTCAGAGTCTCTTAACATTACTCATCCAGCTAGATGAGCTAGATTGTAAAGCT
TTAACAGCAAATTCTTTGTATGATCTGAATTCAATTCTCCAGCAATCTCAAGGTATTCGAGGAGGCTTATTGCGTAAAGA
AGGAACAGAAAGATGGCATTTAGAAGATAATCTTACTAAGCAAAAATACAGCCAAACTTTCAATGTACTATTACAGCAAT
TAGGTTTCGTTTTTCCAAAATCTATTGATAGTGAAATGACCGTTGATCACTGTATTGTTTTTGGAGCCCGTACTGAACGT
ATGGAAACACGAATAATTGAAACATTGGTTTATTTGCAAAACAACCTTAAAGTAACTGGCCATATTTTTTTATTAGGTTC
CAACCGAAAATTAATTCAAGCGGAAATAGAGCATCTTAAAAGCAAGCTAGAGAAATTGGAGGAAACTCAAAGGAACTATT
GGAGTGAAGTATTTAATGACCCTGAGCAAACTACTGAAGCAAATGCTTTTGTTTTTTTATGGAAATGCATTGTTCCTCAG
CTAACGCAAACTCTTTTAGAAGATAAGATTGTCGGCATTAAATCCACTCGAATTGGAAACTCTTATATTGAACAATTTGG
ACATCGTGCGACTACAGAGGTTACGATCGAAGATTGGATGACCTTCTATAAAGCCGAGGAACCTCAAGCTATTTTTGCTC
TCGCTGAACAACCCTATATTCGTTTAGCTGATCAGTTAAAATTTACAGTGCTTTCCAAAGGTAAAAAGGCCAATACAGAC
GAGCTAATAGAACGAATTAAGAACACAACTTTTTATTTTGCCTTTCCAAATTCAAGCTTTAGCCCACTAATAAGCGTGAT
GTTAGACGAAATTGGCCGTAATGTATACCGGATTTCCGATACTTTAAAGTATCTTGAAAGTCTCGAGTAG

Upstream 100 bases:

>100_bases
TTTGTTTCCAAAGACATAATCGAATTTGTTAAGTTGGTTTTTCCTCTTAACATTCTAGGCAAATGACTATGGAATATTAA
AAAAAAGCAGGGGAAAAGTC

Downstream 100 bases:

>100_bases
TGTGTAGGTGCAGGCTTCATACTTCACAGTTTGGCAGAAAATTCTTATTGCCTATACGCCACAGCAATAAAGATCTGTGA
AATCCTTGGTAATTGACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MQVYPTTSVSSEIHHHVQKQGLKHKLSSTTEKIIQLNPKLLLGESNLFNYDLANHAIVLAPQFQSLLTLLIQLDELDCKA
LTANSLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER
METRIIETLVYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEETQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
LTQTLLEDKIVGIKSTRIGNSYIEQFGHRATTEVTIEDWMTFYKAEEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD
ELIERIKNTTFYFAFPNSSFSPLISVMLDEIGRNVYRISDTLKYLESLE

Sequences:

>Translated_369_residues
MQVYPTTSVSSEIHHHVQKQGLKHKLSSTTEKIIQLNPKLLLGESNLFNYDLANHAIVLAPQFQSLLTLLIQLDELDCKA
LTANSLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER
METRIIETLVYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEETQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
LTQTLLEDKIVGIKSTRIGNSYIEQFGHRATTEVTIEDWMTFYKAEEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD
ELIERIKNTTFYFAFPNSSFSPLISVMLDEIGRNVYRISDTLKYLESLE
>Mature_369_residues
MQVYPTTSVSSEIHHHVQKQGLKHKLSSTTEKIIQLNPKLLLGESNLFNYDLANHAIVLAPQFQSLLTLLIQLDELDCKA
LTANSLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTKQKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTER
METRIIETLVYLQNNLKVTGHIFLLGSNRKLIQAEIEHLKSKLEKLEETQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
LTQTLLEDKIVGIKSTRIGNSYIEQFGHRATTEVTIEDWMTFYKAEEPQAIFALAEQPYIRLADQLKFTVLSKGKKANTD
ELIERIKNTTFYFAFPNSSFSPLISVMLDEIGRNVYRISDTLKYLESLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42484; Mature: 42484

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVYPTTSVSSEIHHHVQKQGLKHKLSSTTEKIIQLNPKLLLGESNLFNYDLANHAIVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCEEEEC
PQFQSLLTLLIQLDELDCKALTANSLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTK
CCHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
QKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTERMETRIIETLVYLQNNLKVTG
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEE
HIFLLGSNRKLIQAEIEHLKSKLEKLEETQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHH
LTQTLLEDKIVGIKSTRIGNSYIEQFGHRATTEVTIEDWMTFYKAEEPQAIFALAEQPYI
HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHCCCHH
RLADQLKFTVLSKGKKANTDELIERIKNTTFYFAFPNSSFSPLISVMLDEIGRNVYRISD
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHH
TLKYLESLE
HHHHHHHCC
>Mature Secondary Structure
MQVYPTTSVSSEIHHHVQKQGLKHKLSSTTEKIIQLNPKLLLGESNLFNYDLANHAIVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCEEEEC
PQFQSLLTLLIQLDELDCKALTANSLYDLNSILQQSQGIRGGLLRKEGTERWHLEDNLTK
CCHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
QKYSQTFNVLLQQLGFVFPKSIDSEMTVDHCIVFGARTERMETRIIETLVYLQNNLKVTG
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEE
HIFLLGSNRKLIQAEIEHLKSKLEKLEETQRNYWSEVFNDPEQTTEANAFVFLWKCIVPQ
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHH
LTQTLLEDKIVGIKSTRIGNSYIEQFGHRATTEVTIEDWMTFYKAEEPQAIFALAEQPYI
HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHCCCHH
RLADQLKFTVLSKGKKANTDELIERIKNTTFYFAFPNSSFSPLISVMLDEIGRNVYRISD
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHH
TLKYLESLE
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA