Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446804

Identifier: 46446804

GI number: 46446804

Start: 1398232

End: 1398474

Strand: Direct

Name: 46446804

Synonym: pc1170

Alternate gene names: NA

Gene position: 1398232-1398474 (Clockwise)

Preceding gene: 46446800

Following gene: 46446805

Centisome position: 57.91

GC content: 29.22

Gene sequence:

>243_bases
ATGGTTAACGTTTATTTTTCCATGTCTATGACTAAGTTTTGTATCCCTCAGTTTATTATCTCAATGCGCTTTAGTCAAAT
TGGTTTCGACATTTTTCTAGATATGTCCTTTTCTGTCAATGCTTTGATATCGAAATTCTCACTCCTTTTTTCATCAAAGT
TATTTTCCATTAAAAATATCGCTTTAAAAAACTCTCTTGATGATTATAAAAAATGCCATATGGTAGACTTGATAAATGAA
TAG

Upstream 100 bases:

>100_bases
GCATCTATAAACCCGCGCTCTCGTAAAACATCCATTACATTTGTCATATTTAAATCCTTGCCTAAGTGTCGAAAGTGCCA
TATCTAAAGTTCAATAATTA

Downstream 100 bases:

>100_bases
AGACTTTTGACTTTTAATTTGAATTAAAAACTTTATTTATTTGATTTTTTTTTTAAATCCTCTATTCTCCGAACTAAGTC
CTAGTTTGAGCATTTTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNIALKNSLDDYKKCHMVDLINE

Sequences:

>Translated_80_residues
MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNIALKNSLDDYKKCHMVDLINE
>Mature_80_residues
MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNIALKNSLDDYKKCHMVDLINE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9294; Mature: 9294

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNI
CEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
ALKNSLDDYKKCHMVDLINE
HHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVNVYFSMSMTKFCIPQFIISMRFSQIGFDIFLDMSFSVNALISKFSLLFSSKLFSIKNI
CEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
ALKNSLDDYKKCHMVDLINE
HHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA