Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446799

Identifier: 46446799

GI number: 46446799

Start: 1393174

End: 1394151

Strand: Reverse

Name: 46446799

Synonym: pc1165

Alternate gene names: NA

Gene position: 1394151-1393174 (Counterclockwise)

Preceding gene: 46446801

Following gene: 46446798

Centisome position: 57.74

GC content: 36.91

Gene sequence:

>978_bases
ATGACATTACCCAAATTGCTTGCCTTTCTCTGTATTATTCTTTTTGGAGCGATTGGAATAGCTGCAATTTTTAAGAGTTC
CTCTACTCCGGTATCTACAAGACCGTCAAATCAAATTCCTCTTGAAATTGATTTAGACCAAAATATACAAGTAATTACCC
CTGCTTTGGCAGTTGCTCAGCAATCACGGTCTCCCGATTTTTCATTATCAACGCTCGAGCTTCCTGAAGCTAATCGAATT
GAAGAATTGTTCGTTAAAGATTCAAAGTTACCCATTGTAGAAACAATTACGTATAAAAGTCGCGTCAATTGGCAAAAAGG
TCGCCCTGCTTGGTTATCTGATTATGCCGCTCATTTTGAAACCTCAAGACATTTTATTGCTCGAAGTCTTAATGGTAAAC
CTGATTATTTAAAACAAGATTTGGCAGAAGGAGAGCGTTTTAACGTTCTTTGCAAAGATAAAAATATTCAATTTTACCTC
ATTGTTGATACCTCTCGTTGTAAAATGTGGTTTTATTATTTAGCTGATGATGAAAAAAAACCTGTTTTAATCAAAACGTA
TCCGGTGGGATTAGGAAGATTGGATTCTTCTAGTAGTTCGGGCTTATTAACACCTCTAGGAAAATATTCTTTAGGAGATC
GCATTGCGACTTATAAACCGAAATCCATGGGCATTTATCAAGGAAAGAAAACGGAAATGATTACTGTTTTTGGAACTAGG
TGGATTCCTTTCGAGCAAGAAATTGGTCATACAACTGCTCCTGCTAAAGGATTCGGTATTCATGGTACACCCTGGGAATA
TCAATCTGGATTAGCAGTGGATCAAATTGATAGTGTAGGGAAATATCAGAGTGACGGATGCATTCGTTTAACGACGCCTG
ATATGGAAGAGTTATTTTCAATTATTGTGACTAAGCCAACAACAATTGAAATTGTTAGAGATTTTTCTGAGGCGACCTTA
CCAGGAATACTGGATTAA

Upstream 100 bases:

>100_bases
TTAGAGGTTTTATCTTTTTTGGCAAAAAGATTTTAACTTCATAACATGAATGAGAAATATAGGTTCTTAAGCCTACATTT
GACGAAAAAAGGTTAAATAC

Downstream 100 bases:

>100_bases
ATAAATCCTAAATTATTAAAAATTAAATAGATAGAACCTTTAAAGGAAGGAGTACTCCGTTGGATATTTTACCCCATGAA
AAGCAAATTCATGAGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTLPKLLAFLCIILFGAIGIAAIFKSSSTPVSTRPSNQIPLEIDLDQNIQVITPALAVAQQSRSPDFSLSTLELPEANRI
EELFVKDSKLPIVETITYKSRVNWQKGRPAWLSDYAAHFETSRHFIARSLNGKPDYLKQDLAEGERFNVLCKDKNIQFYL
IVDTSRCKMWFYYLADDEKKPVLIKTYPVGLGRLDSSSSSGLLTPLGKYSLGDRIATYKPKSMGIYQGKKTEMITVFGTR
WIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAVDQIDSVGKYQSDGCIRLTTPDMEELFSIIVTKPTTIEIVRDFSEATL
PGILD

Sequences:

>Translated_325_residues
MTLPKLLAFLCIILFGAIGIAAIFKSSSTPVSTRPSNQIPLEIDLDQNIQVITPALAVAQQSRSPDFSLSTLELPEANRI
EELFVKDSKLPIVETITYKSRVNWQKGRPAWLSDYAAHFETSRHFIARSLNGKPDYLKQDLAEGERFNVLCKDKNIQFYL
IVDTSRCKMWFYYLADDEKKPVLIKTYPVGLGRLDSSSSSGLLTPLGKYSLGDRIATYKPKSMGIYQGKKTEMITVFGTR
WIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAVDQIDSVGKYQSDGCIRLTTPDMEELFSIIVTKPTTIEIVRDFSEATL
PGILD
>Mature_324_residues
TLPKLLAFLCIILFGAIGIAAIFKSSSTPVSTRPSNQIPLEIDLDQNIQVITPALAVAQQSRSPDFSLSTLELPEANRIE
ELFVKDSKLPIVETITYKSRVNWQKGRPAWLSDYAAHFETSRHFIARSLNGKPDYLKQDLAEGERFNVLCKDKNIQFYLI
VDTSRCKMWFYYLADDEKKPVLIKTYPVGLGRLDSSSSSGLLTPLGKYSLGDRIATYKPKSMGIYQGKKTEMITVFGTRW
IPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAVDQIDSVGKYQSDGCIRLTTPDMEELFSIIVTKPTTIEIVRDFSEATLP
GILD

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36372; Mature: 36241

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPKLLAFLCIILFGAIGIAAIFKSSSTPVSTRPSNQIPLEIDLDQNIQVITPALAVAQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHH
QSRSPDFSLSTLELPEANRIEELFVKDSKLPIVETITYKSRVNWQKGRPAWLSDYAAHFE
HCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHH
TSRHFIARSLNGKPDYLKQDLAEGERFNVLCKDKNIQFYLIVDTSRCKMWFYYLADDEKK
HHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCC
PVLIKTYPVGLGRLDSSSSSGLLTPLGKYSLGDRIATYKPKSMGIYQGKKTEMITVFGTR
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCEEEEEECCC
WIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAVDQIDSVGKYQSDGCIRLTTPDMEELFS
CCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHH
IIVTKPTTIEIVRDFSEATLPGILD
HHHCCCCEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLPKLLAFLCIILFGAIGIAAIFKSSSTPVSTRPSNQIPLEIDLDQNIQVITPALAVAQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHH
QSRSPDFSLSTLELPEANRIEELFVKDSKLPIVETITYKSRVNWQKGRPAWLSDYAAHFE
HCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHH
TSRHFIARSLNGKPDYLKQDLAEGERFNVLCKDKNIQFYLIVDTSRCKMWFYYLADDEKK
HHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCC
PVLIKTYPVGLGRLDSSSSSGLLTPLGKYSLGDRIATYKPKSMGIYQGKKTEMITVFGTR
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCEEEEEECCC
WIPFEQEIGHTTAPAKGFGIHGTPWEYQSGLAVDQIDSVGKYQSDGCIRLTTPDMEELFS
CCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHH
IIVTKPTTIEIVRDFSEATLPGILD
HHHCCCCEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA