| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446793
Identifier: 46446793
GI number: 46446793
Start: 1387312
End: 1387884
Strand: Direct
Name: 46446793
Synonym: pc1159
Alternate gene names: NA
Gene position: 1387312-1387884 (Clockwise)
Preceding gene: 46446786
Following gene: 46446794
Centisome position: 57.46
GC content: 38.05
Gene sequence:
>573_bases GTGTTATTTTTTAACATGATACCCATTATAGCTATGAAATATTATCTTCTCATCCCTTTCTTTTATTTGCTTATTTTTTC AACTCTTCATCCTGTCCAGGGGCAAGAAACAGCATACGGGGAACAACTCGGTGAAATAGATTTTTCTCCAGAGTCGCAAA ACCATTTACCACAAAAAAGTATTTCTCTTGAAGAAAACTTGCACGATCCTTTAATAGATCCAGAGTTGACGGAAACAGAT CATTTTCAAGCAAAATTTATGAATATGTTATTCATCCTAGGACTATTAATTAGCTTTATGCTCTTGGCTTCTTGGATGCT CAAACGCATGACTAAATCAAAAGTCACTCAAATGAACCAAGCCAGCTCCATTAAGGTCCTAGAAACTAGGCACTTAACAC CACGATCTACTATTTATTTGATTGAAGTGAAAGGACAGCATCTTTTAATTGGCGAATCTGTAGCCGGGGTTTCCCATCTC GCAACCATCGGATTTTTGGAAGAAGGGGACGACACTAATTACAAGCGCCCTGCAATTCCCCCTTATTTTTCCAATCCGAC TAAGCTATCCTAA
Upstream 100 bases:
>100_bases GAATGCTTTCTGTTTCTGCCGTGACAGTTCCATCTATATCTAATGCAAATATTCCTTTTATTTTGCGAAAAAACATAGGA AAAAAACTGTTGAGAATGTA
Downstream 100 bases:
>100_bases GATGAAATTTCAGATTTAAAAATTGAAAATTTTTTGAATCTAGCCTATTTTTTATACGCCATCTTAAGTGGCTATTGCGA GAATTTAATGAAACAGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLFFNMIPIIAMKYYLLIPFFYLLIFSTLHPVQGQETAYGEQLGEIDFSPESQNHLPQKSISLEENLHDPLIDPELTETD HFQAKFMNMLFILGLLISFMLLASWMLKRMTKSKVTQMNQASSIKVLETRHLTPRSTIYLIEVKGQHLLIGESVAGVSHL ATIGFLEEGDDTNYKRPAIPPYFSNPTKLS
Sequences:
>Translated_190_residues MLFFNMIPIIAMKYYLLIPFFYLLIFSTLHPVQGQETAYGEQLGEIDFSPESQNHLPQKSISLEENLHDPLIDPELTETD HFQAKFMNMLFILGLLISFMLLASWMLKRMTKSKVTQMNQASSIKVLETRHLTPRSTIYLIEVKGQHLLIGESVAGVSHL ATIGFLEEGDDTNYKRPAIPPYFSNPTKLS >Mature_190_residues MLFFNMIPIIAMKYYLLIPFFYLLIFSTLHPVQGQETAYGEQLGEIDFSPESQNHLPQKSISLEENLHDPLIDPELTETD HFQAKFMNMLFILGLLISFMLLASWMLKRMTKSKVTQMNQASSIKVLETRHLTPRSTIYLIEVKGQHLLIGESVAGVSHL ATIGFLEEGDDTNYKRPAIPPYFSNPTKLS
Specific function: Unknown
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21709; Mature: 21709
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFNMIPIIAMKYYLLIPFFYLLIFSTLHPVQGQETAYGEQLGEIDFSPESQNHLPQKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHH ISLEENLHDPLIDPELTETDHFQAKFMNMLFILGLLISFMLLASWMLKRMTKSKVTQMNQ CCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASSIKVLETRHLTPRSTIYLIEVKGQHLLIGESVAGVSHLATIGFLEEGDDTNYKRPAIP CCCEEEHHHCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCC PYFSNPTKLS CCCCCCCCCC >Mature Secondary Structure MLFFNMIPIIAMKYYLLIPFFYLLIFSTLHPVQGQETAYGEQLGEIDFSPESQNHLPQKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHH ISLEENLHDPLIDPELTETDHFQAKFMNMLFILGLLISFMLLASWMLKRMTKSKVTQMNQ CCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASSIKVLETRHLTPRSTIYLIEVKGQHLLIGESVAGVSHLATIGFLEEGDDTNYKRPAIP CCCEEEHHHCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCC PYFSNPTKLS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA