| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is fabI [H]
Identifier: 46446786
GI number: 46446786
Start: 1381433
End: 1382344
Strand: Direct
Name: fabI [H]
Synonym: pc1152
Alternate gene names: 46446786
Gene position: 1381433-1382344 (Clockwise)
Preceding gene: 46446784
Following gene: 46446793
Centisome position: 57.21
GC content: 41.23
Gene sequence:
>912_bases ATGCAAATCAATTTAAAGGGAAAAAAAGCTTTTATTGCTGGAGTAGGAGATGATCAAGGCTTTGGATGGGCCATTGCTAA AGCCCTTGCCGAAGCAGGAGCGGAAATCATTATCGGAACTTGGACTCCTATTTTGAAGATTTTTACTTCTAGCTTGCAGG CGGGAAAATTTGATGCTTCACGCCGTTTACCTAATGGATCTTTACTTACTTTTGCTAAAATTTATCCCCTAGATGCTTCT TTTGATAAACCCGAAGATGTTCCAGAAGAAATTAGGGAGAACAAAAGATATAAGGGTGTTGGAGGCTATACCATTTCTGA GGTCTGCGAAGCAATTGGAAAGGATTTTGGAAAGATAGATATTTTCGTCCATTCCCTTGCCAACGCACCTGAAGTACAAA AACCCTTATTAGAAACAAGCCGAAAAGGATATCTAGCAGCTCTTAGCTCTTCCTCTTATTCATTTGTGAGTTTATTGTCT CATCTTGGACCTTATCTCAATTCTCAAGGGTCAGCCTTAACTCTGACTTACCTCGCCTCAGAAAAAATTATTCCAGGCTA TGGAGGCGGTATGAGCTCTGCGAAAGCGGCTTTAGAGAGTGATACCAGGACTTTAGCCTGGGAAGCCGGCAGAAAATGGA ATATTCGCGTAAATACCATTTCGGCTGGCCCCCTACGAAGTCGTGCAGCTAGAGCAATTGGTTTTATTGATCGTATGATT AATTATTCTCAAGTGAATGCTCCCCTTCAAGAAGAGCTTAAAGCTTGTGAAGTGGCAAATGTTGCGGCTTTTTTAGGATC AGATTTAGCCTGTGCAATTACTGGATCTACAATTTATGTAGATTACGGCCTTCATGCGATGGGAGTAGGAATGGATAGCC CAACTTTAAAAGAAGCAGAACAAGAAGTTTAA
Upstream 100 bases:
>100_bases ATAAACACCTTTGTAGCTCTAAAAAAAACTTCGACAAACTTATAAGTAAAATCTTACAATGGAGCCCACTTAAAATTTTC TATAATAAGGAGTTTCTCAA
Downstream 100 bases:
>100_bases TTTTTTTAATGAAAAATATGCTTTCAACGAATGAAATTTTTCTTTCGAAAAATTTCATTCGGACTATATGTAATAGAAAG AAATTTAAATAAAATATTTT
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MQINLKGKKAFIAGVGDDQGFGWAIAKALAEAGAEIIIGTWTPILKIFTSSLQAGKFDASRRLPNGSLLTFAKIYPLDAS FDKPEDVPEEIRENKRYKGVGGYTISEVCEAIGKDFGKIDIFVHSLANAPEVQKPLLETSRKGYLAALSSSSYSFVSLLS HLGPYLNSQGSALTLTYLASEKIIPGYGGGMSSAKAALESDTRTLAWEAGRKWNIRVNTISAGPLRSRAARAIGFIDRMI NYSQVNAPLQEELKACEVANVAAFLGSDLACAITGSTIYVDYGLHAMGVGMDSPTLKEAEQEV
Sequences:
>Translated_303_residues MQINLKGKKAFIAGVGDDQGFGWAIAKALAEAGAEIIIGTWTPILKIFTSSLQAGKFDASRRLPNGSLLTFAKIYPLDAS FDKPEDVPEEIRENKRYKGVGGYTISEVCEAIGKDFGKIDIFVHSLANAPEVQKPLLETSRKGYLAALSSSSYSFVSLLS HLGPYLNSQGSALTLTYLASEKIIPGYGGGMSSAKAALESDTRTLAWEAGRKWNIRVNTISAGPLRSRAARAIGFIDRMI NYSQVNAPLQEELKACEVANVAAFLGSDLACAITGSTIYVDYGLHAMGVGMDSPTLKEAEQEV >Mature_303_residues MQINLKGKKAFIAGVGDDQGFGWAIAKALAEAGAEIIIGTWTPILKIFTSSLQAGKFDASRRLPNGSLLTFAKIYPLDAS FDKPEDVPEEIRENKRYKGVGGYTISEVCEAIGKDFGKIDIFVHSLANAPEVQKPLLETSRKGYLAALSSSSYSFVSLLS HLGPYLNSQGSALTLTYLASEKIIPGYGGGMSSAKAALESDTRTLAWEAGRKWNIRVNTISAGPLRSRAARAIGFIDRMI NYSQVNAPLQEELKACEVANVAAFLGSDLACAITGSTIYVDYGLHAMGVGMDSPTLKEAEQEV
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=283, Percent_Identity=31.4487632508834, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 32467; Mature: 32467
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQINLKGKKAFIAGVGDDQGFGWAIAKALAEAGAEIIIGTWTPILKIFTSSLQAGKFDAS CEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCHH RRLPNGSLLTFAKIYPLDASFDKPEDVPEEIRENKRYKGVGGYTISEVCEAIGKDFGKID HCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH IFVHSLANAPEVQKPLLETSRKGYLAALSSSSYSFVSLLSHLGPYLNSQGSALTLTYLAS HHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEC EKIIPGYGGGMSSAKAALESDTRTLAWEAGRKWNIRVNTISAGPLRSRAARAIGFIDRMI CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHH NYSQVNAPLQEELKACEVANVAAFLGSDLACAITGSTIYVDYGLHAMGVGMDSPTLKEAE HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCEEEECCCCCCCHHHHH QEV HCC >Mature Secondary Structure MQINLKGKKAFIAGVGDDQGFGWAIAKALAEAGAEIIIGTWTPILKIFTSSLQAGKFDAS CEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCHH RRLPNGSLLTFAKIYPLDASFDKPEDVPEEIRENKRYKGVGGYTISEVCEAIGKDFGKID HCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHH IFVHSLANAPEVQKPLLETSRKGYLAALSSSSYSFVSLLSHLGPYLNSQGSALTLTYLAS HHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEC EKIIPGYGGGMSSAKAALESDTRTLAWEAGRKWNIRVNTISAGPLRSRAARAIGFIDRMI CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHH NYSQVNAPLQEELKACEVANVAAFLGSDLACAITGSTIYVDYGLHAMGVGMDSPTLKEAE HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCEEEECCCCCCCHHHHH QEV HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8391534; 11759840 [H]