Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446771

Identifier: 46446771

GI number: 46446771

Start: 1367579

End: 1368811

Strand: Direct

Name: 46446771

Synonym: pc1137

Alternate gene names: NA

Gene position: 1367579-1368811 (Clockwise)

Preceding gene: 46446770

Following gene: 46446773

Centisome position: 56.64

GC content: 37.39

Gene sequence:

>1233_bases
ATGGATCCCATTCTTGGAGCAGGAACAGGCGCCCTATTAAATCAATTGTTTAATCGCGTTGATCAATCCATTGATCGAGC
TAAAAATGCGGGTTTGGCTCTAGAGATGGAGGCAGGCTTTCAGGTTAGAAAAACAATTGAGAAAACACAAGTGGCTTATG
CTGAGGTAATGAATCAAACTTTAGATCGAGTTGATCAAACTCTTGCAAACCAAATAAACGATATAAAAAATTTGGTTTTG
GATCTAGAACAAAAAAATAAACGTACCATGCAAGAGATTGCCAGTCAGGCGCAAACGATTGCTAATACACTCCCCTTTCA
TAATGACCGCCCTCAAGTTACTTCTTACACCCCATCGTATATTCAAAGATTACCAGGTGATTCTCGCCCCATATATATTA
ATATTAAAGGCAATTTTGAACATGCAGCTGAGCCCGGTTACCAACCTCAGCTTACTTTTCATAAACAAACTTTTTCTCCT
TGCATAGTCACAGGACAAAAATTAGAATTTCACGTTCCATTTAACACAGTATTTCCTACTTTAGCTTCTCATACTTTTAC
TTATGTTGAAGGTGAATTAAATATTCCCTGGAAAACAACATGGTTAAAGATGCCACAAAAAGTTCAAAATGTTTTTCGAT
TAACAATTGGTGCACTCCCAACTTCACCAGGCACTATTACCTTAGACTATACGCTGGATGTTTCAAAAAAAATTGAAAAA
ATAAAGTCACAAATTGATTTTCTATCTTCGTGTTCGGATGCAGGAAATGAGGACAAAAAAGATTATCAGTTTACGCTTTA
TGCAGATACGGGCTGGAATATTGAGCCAGGGACAACCAAAGTAAGAGAAGTCAGAGGAGCCGGAAGGCGCAGTGGACCTT
ACCTTGTCAGCGACCAAGATGATCGAGCCGTTATCAGAGCAACAACAATAAAAAACACTGTGGATATAGGAGGAAAAGAA
TCTGGATGGATGGAAATTGAAACTTCTTTCACACAATCAAAAATAGAAATAGTTCCTGAACCCCACACAAAACGCTTAGA
TCTTAAGTGGGGAGAAAAACGAATTTTTAATTATCCTCTTGGCAAATGGAAAGTAACTTTAGTGGATTTAGAAAATAAAA
CGTTGGAATTTCAAGGACCGGATATTTCTTCTTCACCTTATATCAAAATTTTAAGGGAAGGGACAGGCTTTGCTATCCTA
GTTACTCCTCCTCAAGATATTCAAGATTTTTAA

Upstream 100 bases:

>100_bases
TGTAAAACTTGTAGAAAAACAATTTGAATTTATAACAACAATTCCTGAAGAGCTAAAAGATATTTAAAGATTGTCTTAAT
TAAAAAGGAGGATATGAATT

Downstream 100 bases:

>100_bases
TATTAATTTATAAAAAAAGTATAGGGAGCTTTTAAAATTTTTACTTTAAAAAAATTAAAAGCTCCATATATACATATTTG
ACAAAGAAAAACTCAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MDPILGAGTGALLNQLFNRVDQSIDRAKNAGLALEMEAGFQVRKTIEKTQVAYAEVMNQTLDRVDQTLANQINDIKNLVL
DLEQKNKRTMQEIASQAQTIANTLPFHNDRPQVTSYTPSYIQRLPGDSRPIYINIKGNFEHAAEPGYQPQLTFHKQTFSP
CIVTGQKLEFHVPFNTVFPTLASHTFTYVEGELNIPWKTTWLKMPQKVQNVFRLTIGALPTSPGTITLDYTLDVSKKIEK
IKSQIDFLSSCSDAGNEDKKDYQFTLYADTGWNIEPGTTKVREVRGAGRRSGPYLVSDQDDRAVIRATTIKNTVDIGGKE
SGWMEIETSFTQSKIEIVPEPHTKRLDLKWGEKRIFNYPLGKWKVTLVDLENKTLEFQGPDISSSPYIKILREGTGFAIL
VTPPQDIQDF

Sequences:

>Translated_410_residues
MDPILGAGTGALLNQLFNRVDQSIDRAKNAGLALEMEAGFQVRKTIEKTQVAYAEVMNQTLDRVDQTLANQINDIKNLVL
DLEQKNKRTMQEIASQAQTIANTLPFHNDRPQVTSYTPSYIQRLPGDSRPIYINIKGNFEHAAEPGYQPQLTFHKQTFSP
CIVTGQKLEFHVPFNTVFPTLASHTFTYVEGELNIPWKTTWLKMPQKVQNVFRLTIGALPTSPGTITLDYTLDVSKKIEK
IKSQIDFLSSCSDAGNEDKKDYQFTLYADTGWNIEPGTTKVREVRGAGRRSGPYLVSDQDDRAVIRATTIKNTVDIGGKE
SGWMEIETSFTQSKIEIVPEPHTKRLDLKWGEKRIFNYPLGKWKVTLVDLENKTLEFQGPDISSSPYIKILREGTGFAIL
VTPPQDIQDF
>Mature_410_residues
MDPILGAGTGALLNQLFNRVDQSIDRAKNAGLALEMEAGFQVRKTIEKTQVAYAEVMNQTLDRVDQTLANQINDIKNLVL
DLEQKNKRTMQEIASQAQTIANTLPFHNDRPQVTSYTPSYIQRLPGDSRPIYINIKGNFEHAAEPGYQPQLTFHKQTFSP
CIVTGQKLEFHVPFNTVFPTLASHTFTYVEGELNIPWKTTWLKMPQKVQNVFRLTIGALPTSPGTITLDYTLDVSKKIEK
IKSQIDFLSSCSDAGNEDKKDYQFTLYADTGWNIEPGTTKVREVRGAGRRSGPYLVSDQDDRAVIRATTIKNTVDIGGKE
SGWMEIETSFTQSKIEIVPEPHTKRLDLKWGEKRIFNYPLGKWKVTLVDLENKTLEFQGPDISSSPYIKILREGTGFAIL
VTPPQDIQDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46248; Mature: 46248

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPILGAGTGALLNQLFNRVDQSIDRAKNAGLALEMEAGFQVRKTIEKTQVAYAEVMNQT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LDRVDQTLANQINDIKNLVLDLEQKNKRTMQEIASQAQTIANTLPFHNDRPQVTSYTPSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
IQRLPGDSRPIYINIKGNFEHAAEPGYQPQLTFHKQTFSPCIVTGQKLEFHVPFNTVFPT
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCEEEEECCHHHHHHH
LASHTFTYVEGELNIPWKTTWLKMPQKVQNVFRLTIGALPTSPGTITLDYTLDVSKKIEK
HHCCEEEEEECEEECCEEHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHH
IKSQIDFLSSCSDAGNEDKKDYQFTLYADTGWNIEPGTTKVREVRGAGRRSGPYLVSDQD
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEECCCC
DRAVIRATTIKNTVDIGGKESGWMEIETSFTQSKIEIVPEPHTKRLDLKWGEKRIFNYPL
CCEEEEEEEECCHHCCCCCCCCCEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEECCC
GKWKVTLVDLENKTLEFQGPDISSSPYIKILREGTGFAILVTPPQDIQDF
CCEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHCCCC
>Mature Secondary Structure
MDPILGAGTGALLNQLFNRVDQSIDRAKNAGLALEMEAGFQVRKTIEKTQVAYAEVMNQT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LDRVDQTLANQINDIKNLVLDLEQKNKRTMQEIASQAQTIANTLPFHNDRPQVTSYTPSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
IQRLPGDSRPIYINIKGNFEHAAEPGYQPQLTFHKQTFSPCIVTGQKLEFHVPFNTVFPT
HHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCEEEEECCHHHHHHH
LASHTFTYVEGELNIPWKTTWLKMPQKVQNVFRLTIGALPTSPGTITLDYTLDVSKKIEK
HHCCEEEEEECEEECCEEHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHH
IKSQIDFLSSCSDAGNEDKKDYQFTLYADTGWNIEPGTTKVREVRGAGRRSGPYLVSDQD
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEECCCC
DRAVIRATTIKNTVDIGGKESGWMEIETSFTQSKIEIVPEPHTKRLDLKWGEKRIFNYPL
CCEEEEEEEECCHHCCCCCCCCCEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEECCC
GKWKVTLVDLENKTLEFQGPDISSSPYIKILREGTGFAILVTPPQDIQDF
CCEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCEEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA