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The map label for this gene is 46446690

Identifier: 46446690

GI number: 46446690

Start: 1256880

End: 1258439

Strand: Direct

Name: 46446690

Synonym: pc1056

Alternate gene names: NA

Gene position: 1256880-1258439 (Clockwise)

Preceding gene: 46446689

Following gene: 46446691

Centisome position: 52.06

GC content: 37.5

Gene sequence:

>1560_bases
ATGATTGAAAATCAAGTCCCTTTTTATCTCCTGATTTTTCTGGTTGGAATTGGTTTGGGAGTATTAACCTTTTGGGCTTA
TCATCGATTTGCCTTAGGAGGTTTCAAACGCATATCAAAAGACATAATCAGTCGAGCCGAACAAGAAACATCTGAGCTGA
GGAAAACAAACGAGTTAAGCCTAAAACAAAAACAAGTGGAATATCAACGTGAACTTGAACAGATGTGGCAGCAAGAACGA
AAAAAACTTCAACAAGAAGAAGAGCGTTTAAAGCAAAGAGAAGATAAGCTTGAAAGTCGCATGAATCTCGTAGAAAAAAA
ATTGTCGGACACTGAAAAAAGAGAGGCCATATTAATTGGGCGCAAAGCTCAATTGGATGAGGAAAAGAAACAAACAATTG
AATCTCACTCAAAACTACTTTCTATTTTAGAAAAAGCTTCTGGCTTAACTTCTTCTGAAGCTAAGGAAATACTTTTATCA
CGTTTAAGTAATGAAGTTAAAACTGAATCTGCTAATTTAATTCGTAGAATTCGAAAAGAAGCTGAAGAAGAAGCTGAGAA
AATAGCTTCAACAATTATTGCAACATCCATTAATCGATTGGCTGTTTCTTGTGCCTCTGAATCTACTGTTTGTACAGTCA
CTATTCCAAATGAAGACATGAAAGGTCGTATTATTGGACGTGAAGGTCGTAATATTCGAGCTTTAGAAAGAGAAACAGGC
GTTAACTTTATTATCGACGATACGCCAGGTGCAGTTGTCTTGTCAGGTTTCGATCCGGTTAGAAAACATATTGCTAAAAT
GGCTTTAACAGAACTTGTTCAAGATGGACGGATTCATCCAACAAGAATTGAAGAAGTCGTGGAAAAAGCGACTATTAATG
TTCATAAACAAATTAAGCAATATGGTGAAGACGCGGCTTTAAGAGCCGGGGCGATGAACTTACATCCCGACCTGATTAAT
TTATTAGGAAAATTAAAATTCCGTTTTAGTTATGGTCAGAATGTTTTAGATCATTCCCTTGAAGTATCCCATTTAATGGG
TTTAATGGCAGCGGAACTCGGATTAGATATTCGACTTGCAAAAAGAATTGGTTTATTACATGACTTAGGAAAAGCTGTTA
CTCATGAAATTGAAGGATCTCATGCAATTATTGGACATGATTTGGCTCTTAAATTAGGCGAAAATAAAGAAGTTGCTAAC
GGAATAGGTTGTCACCATCATGAAATGGCACCCTTAACCATTGAAGCGGATTTATGTAGCGCTGCAGATGCTATTTCAGC
TTCCCGGGAAGGGGCTCGAATAGAGGCGGTTGAAGAATACATTAAACGATTGAGAAAACTGGAAGAAATCGCTCTTGAAT
TTGCAGGTGTTGATAAAGCCTATGCGATGCAGGCAGGCCGAGAAATACGCATTGTTGTCCTACCTGACCAAGTTGATGAT
GCAGGCGTTGTCAATTTAGCTCGCGATCTTACAAAACGAATAGAGCAAGAATTAAGTTATCCAGGAAAAATTAAAGTGAC
AGTTATTAGGGAAAAAAGAGTTGTTGAATACGCTGTCTAA

Upstream 100 bases:

>100_bases
TCACAATTACTTTTAATTTAGACGGCTTTTTGCATCGCCTATAACATAAGACATGAATTGCCCATTCAAATTGATTTGAT
GATTAAGGACACAACAATCA

Downstream 100 bases:

>100_bases
ACTAAATATGATGACCGAATAAAAAATTTATTTTCAAACAATTAATTCAGCATCAACTAATCGGTATTACTTGAAAAACA
ATTAGTTTTGAGGCAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MIENQVPFYLLIFLVGIGLGVLTFWAYHRFALGGFKRISKDIISRAEQETSELRKTNELSLKQKQVEYQRELEQMWQQER
KKLQQEEERLKQREDKLESRMNLVEKKLSDTEKREAILIGRKAQLDEEKKQTIESHSKLLSILEKASGLTSSEAKEILLS
RLSNEVKTESANLIRRIRKEAEEEAEKIASTIIATSINRLAVSCASESTVCTVTIPNEDMKGRIIGREGRNIRALERETG
VNFIIDDTPGAVVLSGFDPVRKHIAKMALTELVQDGRIHPTRIEEVVEKATINVHKQIKQYGEDAALRAGAMNLHPDLIN
LLGKLKFRFSYGQNVLDHSLEVSHLMGLMAAELGLDIRLAKRIGLLHDLGKAVTHEIEGSHAIIGHDLALKLGENKEVAN
GIGCHHHEMAPLTIEADLCSAADAISASREGARIEAVEEYIKRLRKLEEIALEFAGVDKAYAMQAGREIRIVVLPDQVDD
AGVVNLARDLTKRIEQELSYPGKIKVTVIREKRVVEYAV

Sequences:

>Translated_519_residues
MIENQVPFYLLIFLVGIGLGVLTFWAYHRFALGGFKRISKDIISRAEQETSELRKTNELSLKQKQVEYQRELEQMWQQER
KKLQQEEERLKQREDKLESRMNLVEKKLSDTEKREAILIGRKAQLDEEKKQTIESHSKLLSILEKASGLTSSEAKEILLS
RLSNEVKTESANLIRRIRKEAEEEAEKIASTIIATSINRLAVSCASESTVCTVTIPNEDMKGRIIGREGRNIRALERETG
VNFIIDDTPGAVVLSGFDPVRKHIAKMALTELVQDGRIHPTRIEEVVEKATINVHKQIKQYGEDAALRAGAMNLHPDLIN
LLGKLKFRFSYGQNVLDHSLEVSHLMGLMAAELGLDIRLAKRIGLLHDLGKAVTHEIEGSHAIIGHDLALKLGENKEVAN
GIGCHHHEMAPLTIEADLCSAADAISASREGARIEAVEEYIKRLRKLEEIALEFAGVDKAYAMQAGREIRIVVLPDQVDD
AGVVNLARDLTKRIEQELSYPGKIKVTVIREKRVVEYAV
>Mature_519_residues
MIENQVPFYLLIFLVGIGLGVLTFWAYHRFALGGFKRISKDIISRAEQETSELRKTNELSLKQKQVEYQRELEQMWQQER
KKLQQEEERLKQREDKLESRMNLVEKKLSDTEKREAILIGRKAQLDEEKKQTIESHSKLLSILEKASGLTSSEAKEILLS
RLSNEVKTESANLIRRIRKEAEEEAEKIASTIIATSINRLAVSCASESTVCTVTIPNEDMKGRIIGREGRNIRALERETG
VNFIIDDTPGAVVLSGFDPVRKHIAKMALTELVQDGRIHPTRIEEVVEKATINVHKQIKQYGEDAALRAGAMNLHPDLIN
LLGKLKFRFSYGQNVLDHSLEVSHLMGLMAAELGLDIRLAKRIGLLHDLGKAVTHEIEGSHAIIGHDLALKLGENKEVAN
GIGCHHHEMAPLTIEADLCSAADAISASREGARIEAVEEYIKRLRKLEEIALEFAGVDKAYAMQAGREIRIVVLPDQVDD
AGVVNLARDLTKRIEQELSYPGKIKVTVIREKRVVEYAV

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_PARUW (Q6MCB9)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008055.1
- ProteinModelPortal:   Q6MCB9
- SMR:   Q6MCB9
- STRING:   Q6MCB9
- GeneID:   2779979
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1056
- NMPDR:   fig|264201.1.peg.1056
- eggNOG:   COG1418
- HOGENOM:   HBG734610
- OMA:   HPGRIEE
- ProtClustDB:   CLSK2762306
- BioCyc:   CPRO264201:PC1056-MONOMER
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 58387; Mature: 58387

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcff1288)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENQVPFYLLIFLVGIGLGVLTFWAYHRFALGGFKRISKDIISRAEQETSELRKTNELS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQKQVEYQRELEQMWQQERKKLQQEEERLKQREDKLESRMNLVEKKLSDTEKREAILIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEC
RKAQLDEEKKQTIESHSKLLSILEKASGLTSSEAKEILLSRLSNEVKTESANLIRRIRKE
CHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEEAEKIASTIIATSINRLAVSCASESTVCTVTIPNEDMKGRIIGREGRNIRALERETG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCCCCCCCHHHHHCC
VNFIIDDTPGAVVLSGFDPVRKHIAKMALTELVQDGRIHPTRIEEVVEKATINVHKQIKQ
CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YGEDAALRAGAMNLHPDLINLLGKLKFRFSYGQNVLDHSLEVSHLMGLMAAELGLDIRLA
HCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
KRIGLLHDLGKAVTHEIEGSHAIIGHDLALKLGENKEVANGIGCHHHEMAPLTIEADLCS
HHHHHHHHHHHHHHHHCCCCEEEEECHHEEEECCCCCHHCCCCCCCCCCCCEEEEHHHHH
AADAISASREGARIEAVEEYIKRLRKLEEIALEFAGVDKAYAMQAGREIRIVVLPDQVDD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCC
AGVVNLARDLTKRIEQELSYPGKIKVTVIREKRVVEYAV
CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCH
>Mature Secondary Structure
MIENQVPFYLLIFLVGIGLGVLTFWAYHRFALGGFKRISKDIISRAEQETSELRKTNELS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQKQVEYQRELEQMWQQERKKLQQEEERLKQREDKLESRMNLVEKKLSDTEKREAILIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEC
RKAQLDEEKKQTIESHSKLLSILEKASGLTSSEAKEILLSRLSNEVKTESANLIRRIRKE
CHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEEAEKIASTIIATSINRLAVSCASESTVCTVTIPNEDMKGRIIGREGRNIRALERETG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCCCCCCCHHHHHCC
VNFIIDDTPGAVVLSGFDPVRKHIAKMALTELVQDGRIHPTRIEEVVEKATINVHKQIKQ
CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YGEDAALRAGAMNLHPDLINLLGKLKFRFSYGQNVLDHSLEVSHLMGLMAAELGLDIRLA
HCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
KRIGLLHDLGKAVTHEIEGSHAIIGHDLALKLGENKEVANGIGCHHHEMAPLTIEADLCS
HHHHHHHHHHHHHHHHCCCCEEEEECHHEEEECCCCCHHCCCCCCCCCCCCEEEEHHHHH
AADAISASREGARIEAVEEYIKRLRKLEEIALEFAGVDKAYAMQAGREIRIVVLPDQVDD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCC
AGVVNLARDLTKRIEQELSYPGKIKVTVIREKRVVEYAV
CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA