| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446687
Identifier: 46446687
GI number: 46446687
Start: 1253754
End: 1253912
Strand: Direct
Name: 46446687
Synonym: pc1053
Alternate gene names: NA
Gene position: 1253754-1253912 (Clockwise)
Preceding gene: 46446685
Following gene: 46446688
Centisome position: 51.93
GC content: 37.74
Gene sequence:
>159_bases ATGTCTAGACACCCAAGTTTTGGTAAGGCAGGAAAAACTGCCACAAAGCGTAATGTACTTAAACGCTTTGAAAGAATTGA TGTTTTGAAGAAAATTGGCCGTTGGAAAGATTCAGAAAACAAGCGAATTACAGGCCTTCCTAAAACACCTGTTCTATAA
Upstream 100 bases:
>100_bases TAAAGATCATACTAATGCAATCGAAGGTGATCTTGCTGCAGCCGTTTTTATTCCAAAAATTAAATAATTGACTGCTTAAA AACAGAAATAAGGTTTAACA
Downstream 100 bases:
>100_bases TTGTCTATCTTTCTCAATTTTTAGAAACCAGAGTTTTGTTTTTCTTTTTGAACCCAATTCGCTATGAAAACTTAAAAAAT AGTTTTTATTAAGTTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MSRHPSFGKAGKTATKRNVLKRFERIDVLKKIGRWKDSENKRITGLPKTPVL
Sequences:
>Translated_52_residues MSRHPSFGKAGKTATKRNVLKRFERIDVLKKIGRWKDSENKRITGLPKTPVL >Mature_51_residues SRHPSFGKAGKTATKRNVLKRFERIDVLKKIGRWKDSENKRITGLPKTPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5991; Mature: 5860
Theoretical pI: Translated: 12.03; Mature: 12.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHPSFGKAGKTATKRNVLKRFERIDVLKKIGRWKDSENKRITGLPKTPVL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCC >Mature Secondary Structure SRHPSFGKAGKTATKRNVLKRFERIDVLKKIGRWKDSENKRITGLPKTPVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA