Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446686

Identifier: 46446686

GI number: 46446686

Start: 1251800

End: 1253305

Strand: Reverse

Name: 46446686

Synonym: pc1052

Alternate gene names: NA

Gene position: 1253305-1251800 (Counterclockwise)

Preceding gene: 46446692

Following gene: 46446681

Centisome position: 51.91

GC content: 30.81

Gene sequence:

>1506_bases
GTGGGAATTTATAAGACATCTGATCGTTTAACACAGTGTGATCCTCAAATTTATTCCAATTTCTATGATGCTTCTAAAAG
GATAGATCTTCGACATTCATCGATTCAAAGTACTGAATCCATCCGTAAAGACACGTGGGAACTGAGTCGTGAAAATTTAA
AAAAAGAGGCACTAAATCGATTACGTCATCATTCAAAATATACGATTATACACACAGGATTTATGCGGATTGGAAAATAT
TTATTTTTAGCGGTAGCTTTTCCTCCTTATCTTGTGATTTATGGTCTGCCTAAATGGATCTTTGTAGAAGGAATCCCCGC
CCTTGTGCATACCTTATCCACATTCTTGAAAAAAACTAAACAAAAAGTACAAAAGCAAGTAAATGCTTTAAAGCAGAAAA
TAAAAGAAGTTGTTTTAGTTATGCAACAAGCTCTGCAAAAATTGATTAGCCCGATTATTCGTTTAAGTTTAGATATCAAT
CAAGCGCTTCAACGTTTACGATTAAAAATACTTGCTCAAGTAAAGCTGTGGAATCATCAATTAAAAAAAATAACTTCAAA
ACCAGTATTAAACCCTTTAAAAAAGAAAACGGAGCATTTCTTAACAATATCTTATGAAATAATAATAAAAGGAATAAAAA
AAGCACAAAATTGGAAATTACAATCAGTTAACACTTTCCAAACTTTATTATCAATGCTCCAAATTTCAAAACTAAGTGCG
TATACATTTTATTTCGTGAATAAACAAGCTTTTGCATGGAAGGAAAAATGGCACAGTAAATATGAGTTGGCTCAAACTTT
TGCTCAAAAATGGTTAGGTACATCAGAGAATTTATTAAAAATGGGCTTTCAAAAGACTGCTTATCAGTTTTATCCGATCA
AAAAAATTTATTTGCAATCTATCAAACCTTTTTGGGATAGTTTGAAAGTAAGTTATTTTAAAAAACAACAACAATTATTG
AATTGGACGGAAGAATATCATCAAAAATTTTTGCAGTATCTAGCAGATCAACAAGAGCAATTAAAAAATTTAACATTTGA
ACAGGTTAAAGATTATATTTTACTGTATTTAGAGTTTAATTTTTGGCCTCACTTTTTGCGAAGAAATTTTCAACGCTTCG
CCAAGAATAAATTCATTGAATTTATTCTAAGGAGTGTATTTAGAAGCATTGCTTATGGAATCTACCTCTCTTTAAAGGGA
AGTCGCTATTTTATTAAGGTCATCAGTAAAGGAATTCAGGTTATCAATAAAGGATTAGGAATTTTATCCCGCATAATTAA
TTATATTTTCAATTTTCTTTATAAAATTTACACTCTTCTCTCTCGTTGTTTAATACTACTCCTCAATCATGGAAGAAAAT
ACCTAGGAAAATTCGTTTACTCATGTTTGCTTGTTTTTATGATGGTCAGCATTGTGACAATTTGGGGGATTAGTTTATTA
GGTGAGCAAATGTCTTCTTTAGTCAAATTATTTCCACGCGCCACAAAATCAAGTGCCGATTGCTAA

Upstream 100 bases:

>100_bases
TGTTATTTTTGAATTTAGCAAATAAATTTTTGATAACATTTAATTACATAGTTTAAAAAATCAATTAAATATGTTATTAT
TTTAAAAAAAAGGAGCTACG

Downstream 100 bases:

>100_bases
ATTTAAAGATTATTTGAGAAGGGATAAAGCCAGCCCCCAATCTTGGTAATTCTTAAAACGTAATTTAGAATTTTCTAATT
TTTGAGGGTGGCTTTCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MGIYKTSDRLTQCDPQIYSNFYDASKRIDLRHSSIQSTESIRKDTWELSRENLKKEALNRLRHHSKYTIIHTGFMRIGKY
LFLAVAFPPYLVIYGLPKWIFVEGIPALVHTLSTFLKKTKQKVQKQVNALKQKIKEVVLVMQQALQKLISPIIRLSLDIN
QALQRLRLKILAQVKLWNHQLKKITSKPVLNPLKKKTEHFLTISYEIIIKGIKKAQNWKLQSVNTFQTLLSMLQISKLSA
YTFYFVNKQAFAWKEKWHSKYELAQTFAQKWLGTSENLLKMGFQKTAYQFYPIKKIYLQSIKPFWDSLKVSYFKKQQQLL
NWTEEYHQKFLQYLADQQEQLKNLTFEQVKDYILLYLEFNFWPHFLRRNFQRFAKNKFIEFILRSVFRSIAYGIYLSLKG
SRYFIKVISKGIQVINKGLGILSRIINYIFNFLYKIYTLLSRCLILLLNHGRKYLGKFVYSCLLVFMMVSIVTIWGISLL
GEQMSSLVKLFPRATKSSADC

Sequences:

>Translated_501_residues
MGIYKTSDRLTQCDPQIYSNFYDASKRIDLRHSSIQSTESIRKDTWELSRENLKKEALNRLRHHSKYTIIHTGFMRIGKY
LFLAVAFPPYLVIYGLPKWIFVEGIPALVHTLSTFLKKTKQKVQKQVNALKQKIKEVVLVMQQALQKLISPIIRLSLDIN
QALQRLRLKILAQVKLWNHQLKKITSKPVLNPLKKKTEHFLTISYEIIIKGIKKAQNWKLQSVNTFQTLLSMLQISKLSA
YTFYFVNKQAFAWKEKWHSKYELAQTFAQKWLGTSENLLKMGFQKTAYQFYPIKKIYLQSIKPFWDSLKVSYFKKQQQLL
NWTEEYHQKFLQYLADQQEQLKNLTFEQVKDYILLYLEFNFWPHFLRRNFQRFAKNKFIEFILRSVFRSIAYGIYLSLKG
SRYFIKVISKGIQVINKGLGILSRIINYIFNFLYKIYTLLSRCLILLLNHGRKYLGKFVYSCLLVFMMVSIVTIWGISLL
GEQMSSLVKLFPRATKSSADC
>Mature_500_residues
GIYKTSDRLTQCDPQIYSNFYDASKRIDLRHSSIQSTESIRKDTWELSRENLKKEALNRLRHHSKYTIIHTGFMRIGKYL
FLAVAFPPYLVIYGLPKWIFVEGIPALVHTLSTFLKKTKQKVQKQVNALKQKIKEVVLVMQQALQKLISPIIRLSLDINQ
ALQRLRLKILAQVKLWNHQLKKITSKPVLNPLKKKTEHFLTISYEIIIKGIKKAQNWKLQSVNTFQTLLSMLQISKLSAY
TFYFVNKQAFAWKEKWHSKYELAQTFAQKWLGTSENLLKMGFQKTAYQFYPIKKIYLQSIKPFWDSLKVSYFKKQQQLLN
WTEEYHQKFLQYLADQQEQLKNLTFEQVKDYILLYLEFNFWPHFLRRNFQRFAKNKFIEFILRSVFRSIAYGIYLSLKGS
RYFIKVISKGIQVINKGLGILSRIINYIFNFLYKIYTLLSRCLILLLNHGRKYLGKFVYSCLLVFMMVSIVTIWGISLLG
EQMSSLVKLFPRATKSSADC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59351; Mature: 59220

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GIYKTSDRLTQCDPQIYSNFYDASKRIDLRHSSIQSTESIRKDTWELSRENLKKEALNR
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA