Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446679

Identifier: 46446679

GI number: 46446679

Start: 1243160

End: 1243600

Strand: Reverse

Name: 46446679

Synonym: pc1045

Alternate gene names: NA

Gene position: 1243600-1243160 (Counterclockwise)

Preceding gene: 46446681

Following gene: 46446678

Centisome position: 51.51

GC content: 28.8

Gene sequence:

>441_bases
ATGTTCAACAATACCTCTTTAGACGAAGTACCTTTTCTCAAGCAATTGGACGAAGTAGCCAATAAAATTGAATATTTCCA
AAAAAAATATTGCCAACCAGGGGATTCTGTTACTAACCACGAAATTTCTGAATTTATAAAAGACCTTGAATTATATAATA
CATTGATCGAAGGAACCTTAGAGAATAGAAAATTAGTTTTGGCAAATGGACAAAAAAATAATCAACGAATTGAGCAAGCT
TTAAATGCGGTTCTATTATTTCAAAAAGTGAATCCTGATGAAGGAACTAAAAAAAATATTCGACAAGTGATTGCTTCTTT
ATTTAATGATTCTGAGAAAGAACAAAGACGTTTTGAAGAATCTATCAAAAATTTAAGAAGTAAATGGGATAGTTACATGA
AAAAAGTTCATGAAATCGTTAAAAGTAACAAAGTTAATTAA

Upstream 100 bases:

>100_bases
TTGGCTTGCAGATTTCTAAGTATGGGTTATTGTTAATTAAAAGTTTAATCACTTTAATAGTAGTGGATAAGCAAGCGTAG
GACTAAGCGGAGTATGCTAT

Downstream 100 bases:

>100_bases
TCTAGTTTATCTTTTTGAAAGTCATCACATGCAATTTCAACAACAGTTATTTTATCTTTTTGGATCTCTTTTTGGCATGT
TGTCAATAGCTGCGGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MFNNTSLDEVPFLKQLDEVANKIEYFQKKYCQPGDSVTNHEISEFIKDLELYNTLIEGTLENRKLVLANGQKNNQRIEQA
LNAVLLFQKVNPDEGTKKNIRQVIASLFNDSEKEQRRFEESIKNLRSKWDSYMKKVHEIVKSNKVN

Sequences:

>Translated_146_residues
MFNNTSLDEVPFLKQLDEVANKIEYFQKKYCQPGDSVTNHEISEFIKDLELYNTLIEGTLENRKLVLANGQKNNQRIEQA
LNAVLLFQKVNPDEGTKKNIRQVIASLFNDSEKEQRRFEESIKNLRSKWDSYMKKVHEIVKSNKVN
>Mature_146_residues
MFNNTSLDEVPFLKQLDEVANKIEYFQKKYCQPGDSVTNHEISEFIKDLELYNTLIEGTLENRKLVLANGQKNNQRIEQA
LNAVLLFQKVNPDEGTKKNIRQVIASLFNDSEKEQRRFEESIKNLRSKWDSYMKKVHEIVKSNKVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17123; Mature: 17123

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNNTSLDEVPFLKQLDEVANKIEYFQKKYCQPGDSVTNHEISEFIKDLELYNTLIEGTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ENRKLVLANGQKNNQRIEQALNAVLLFQKVNPDEGTKKNIRQVIASLFNDSEKEQRRFEE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
SIKNLRSKWDSYMKKVHEIVKSNKVN
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFNNTSLDEVPFLKQLDEVANKIEYFQKKYCQPGDSVTNHEISEFIKDLELYNTLIEGTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ENRKLVLANGQKNNQRIEQALNAVLLFQKVNPDEGTKKNIRQVIASLFNDSEKEQRRFEE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
SIKNLRSKWDSYMKKVHEIVKSNKVN
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA