| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446641
Identifier: 46446641
GI number: 46446641
Start: 1199428
End: 1199691
Strand: Reverse
Name: 46446641
Synonym: pc1007
Alternate gene names: NA
Gene position: 1199691-1199428 (Counterclockwise)
Preceding gene: 46446642
Following gene: 46446640
Centisome position: 49.69
GC content: 36.74
Gene sequence:
>264_bases ATGGGCCTATTTGCGTGCCAGCCCATTTTTAATTCAAGGCAAAACTATTTTTACAAACAAGAATTTGCCGCTTGCCGTGG AGTGACTTTAAATGAAGTCAATTTTAAATCACTCGAAAGTCTCCGTTACCTATCTTTTTTGCTGGAGAAATTTTCAACAT TGATGAGATCACTAAATGGTTCAATTTTCAAAATACTTGGGGGAACCAACTGGACGAGTTGTTGGTTGTTCAATAGGAAA GCTTATACCCGTCTAACTTTTTAA
Upstream 100 bases:
>100_bases TTTTCATTTTTCCTATTAGGAAAGAAACTTGCTTACTTATCTGGTATCGAGACTAATTTAAGATAAGCAATGCTTTCCGA TAAAAAACCTTCCTTCTTTC
Downstream 100 bases:
>100_bases GATTAAAATAATTAGCATTGTAAAATTTAATTTAAATATCAGTAAATATTAATAATACTAATGATTATTTAAAATACTCA TTATTAATAATTAATATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MGLFACQPIFNSRQNYFYKQEFAACRGVTLNEVNFKSLESLRYLSFLLEKFSTLMRSLNGSIFKILGGTNWTSCWLFNRK AYTRLTF
Sequences:
>Translated_87_residues MGLFACQPIFNSRQNYFYKQEFAACRGVTLNEVNFKSLESLRYLSFLLEKFSTLMRSLNGSIFKILGGTNWTSCWLFNRK AYTRLTF >Mature_86_residues GLFACQPIFNSRQNYFYKQEFAACRGVTLNEVNFKSLESLRYLSFLLEKFSTLMRSLNGSIFKILGGTNWTSCWLFNRKA YTRLTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10230; Mature: 10099
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFACQPIFNSRQNYFYKQEFAACRGVTLNEVNFKSLESLRYLSFLLEKFSTLMRSLNG CCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SIFKILGGTNWTSCWLFNRKAYTRLTF CEEEEECCCCCCEEEEECCCCEEEECC >Mature Secondary Structure GLFACQPIFNSRQNYFYKQEFAACRGVTLNEVNFKSLESLRYLSFLLEKFSTLMRSLNG CCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SIFKILGGTNWTSCWLFNRKAYTRLTF CEEEEECCCCCCEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA