| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446633
Identifier: 46446633
GI number: 46446633
Start: 1191029
End: 1191298
Strand: Reverse
Name: 46446633
Synonym: pc0999
Alternate gene names: NA
Gene position: 1191298-1191029 (Counterclockwise)
Preceding gene: 46446634
Following gene: 46446631
Centisome position: 49.34
GC content: 33.33
Gene sequence:
>270_bases TTGCAGCATCTAAATCTATTTGGCTGTAATAATCTCACCGATGATGGATTAGCGCATTTAACACCCTTAATCGCTTTGCA GCATCTAAATCTAAGCTACTGTATAAATGTCACGGATGATGGATTAGCGCATTTGACACCTTTAACGGCTTTGCAGTATC TAGATTTATTTGGCTGTAATAAACTCACCGATGCAGGATTAGCACGTTTTAAAATTTTAGCAGCTTCACTTAATCTATTA ATAAATAAAGATATAAATAAATTTTCTTAA
Upstream 100 bases:
>100_bases AAGGCATTTTCAGATCAAAAACTAAGGAAATTATGTTTGTGCTATATTAACCCTTAATCTCACGGATGCAGGATTAGCCC ATTTAACACCCTTAATCGCT
Downstream 100 bases:
>100_bases AGATACATATTATCACAGTTAATTCATGCAGTTCCGGTAAGAAAAAAGCTCTCTAGAGATAACTTAAATCCTTTTGTTGA TTTAGGATTCAAATTCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MQHLNLFGCNNLTDDGLAHLTPLIALQHLNLSYCINVTDDGLAHLTPLTALQYLDLFGCNKLTDAGLARFKILAASLNLL INKDINKFS
Sequences:
>Translated_89_residues MQHLNLFGCNNLTDDGLAHLTPLIALQHLNLSYCINVTDDGLAHLTPLTALQYLDLFGCNKLTDAGLARFKILAASLNLL INKDINKFS >Mature_89_residues MQHLNLFGCNNLTDDGLAHLTPLIALQHLNLSYCINVTDDGLAHLTPLTALQYLDLFGCNKLTDAGLARFKILAASLNLL INKDINKFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9765; Mature: 9765
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLNLFGCNNLTDDGLAHLTPLIALQHLNLSYCINVTDDGLAHLTPLTALQYLDLFGCN CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC KLTDAGLARFKILAASLNLLINKDINKFS CCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQHLNLFGCNNLTDDGLAHLTPLIALQHLNLSYCINVTDDGLAHLTPLTALQYLDLFGCN CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC KLTDAGLARFKILAASLNLLINKDINKFS CCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA