Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446632

Identifier: 46446632

GI number: 46446632

Start: 1190729

End: 1190947

Strand: Direct

Name: 46446632

Synonym: pc0998

Alternate gene names: NA

Gene position: 1190729-1190947 (Clockwise)

Preceding gene: 46446627

Following gene: 46446636

Centisome position: 49.32

GC content: 34.25

Gene sequence:

>219_bases
ATGGAAAAAGCAAAAGTAATGAGCTTCGTAGAATTCCGTCAAAACTTATCAGAATGTGTTAACTTAGCAAAATATAAAGG
CGAGAGATTTTTGATTACTCGTAATGGAAAAGCCGTAGGTGCTTTTGCCCCTGTAGAGGATTTAGAAAAAATTAATGCAT
TTAATAATGTAATTGCTGACACAGCCACTGATGAGATAAGCTCAGAATTTGAATCCTAA

Upstream 100 bases:

>100_bases
TGACTTATTTATCAATACAATTATTTACTATATTTTATAGTCATAAACTTGTTATCTAATAAATTTATTAATTTAATCAA
AAGATATATAGGTTAATGAT

Downstream 100 bases:

>100_bases
ATCAACAAAAGGATTTAAGTTATCTCTAGAGAGCTTTTTTCTTACCGGAACTGCATGAATTAACTGTGATAATATGTATC
TTTAAGAAAATTTATTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIADTATDEISSEFES

Sequences:

>Translated_72_residues
MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIADTATDEISSEFES
>Mature_72_residues
MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIADTATDEISSEFES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8063; Mature: 8063

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIAD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHC
TATDEISSEFES
CHHHHHHHHCCC
>Mature Secondary Structure
MEKAKVMSFVEFRQNLSECVNLAKYKGERFLITRNGKAVGAFAPVEDLEKINAFNNVIAD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHC
TATDEISSEFES
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA