| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446624
Identifier: 46446624
GI number: 46446624
Start: 1183535
End: 1183792
Strand: Direct
Name: 46446624
Synonym: pc0990
Alternate gene names: NA
Gene position: 1183535-1183792 (Clockwise)
Preceding gene: 46446623
Following gene: 46446625
Centisome position: 49.02
GC content: 30.23
Gene sequence:
>258_bases ATGAAATATGAATTATTCGTTAACCCAAGGGTTGAAAAAGCGCTATCTAAAATTGATAAGCATATGGCTTTAAAAATAAG AAATAACATTAGATCACTTGCAGCTAACCCTAGGCCATTGGGAGTAAAAAAAATTAAAGGTAATGATAACGCATATAGAA TTCGTGTTGGTGACTATAGGATTATTTATGAAATTTATGACTCAAAAATTCTCATTTTGATTGTTAACGTGGGTCATAGG AAAGAAGTATACGAATAA
Upstream 100 bases:
>100_bases TGGATGATTCATCTTTAGGCAAGGCAAGGAAAGAGGTTGCAGATAATGGGGTTATCAGTTGGAAAGAGCTGGAACAAAGA CTTGGTTGGGATAATTTGTA
Downstream 100 bases:
>100_bases AAAAACAAAAAATCTAATACGTAAGAAATCTGTTATATTTTCGTCAAAAAAAAGCATTTTCCAACTATTCTAAACGTAGA TGGCATAAATTTTAGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module xin RelE/StbE Family; Addiction Module Antitoxin; Addiction Module xin; Plasmid Stabilization System Protein Protein Like; Plasmid Stability Protein; Addiction Module xin RelE/StbE; RelE/StbE Family Addiction Module xin
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYRIIYEIYDSKILILIVNVGHR KEVYE
Sequences:
>Translated_85_residues MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYRIIYEIYDSKILILIVNVGHR KEVYE >Mature_85_residues MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYRIIYEIYDSKILILIVNVGHR KEVYE
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9984; Mature: 9984
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYR CEEEEEECCCHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEE IIYEIYDSKILILIVNVGHRKEVYE EEEEEECCEEEEEEEECCCCCCCCC >Mature Secondary Structure MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYR CEEEEEECCCHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEE IIYEIYDSKILILIVNVGHRKEVYE EEEEEECCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA