Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446624

Identifier: 46446624

GI number: 46446624

Start: 1183535

End: 1183792

Strand: Direct

Name: 46446624

Synonym: pc0990

Alternate gene names: NA

Gene position: 1183535-1183792 (Clockwise)

Preceding gene: 46446623

Following gene: 46446625

Centisome position: 49.02

GC content: 30.23

Gene sequence:

>258_bases
ATGAAATATGAATTATTCGTTAACCCAAGGGTTGAAAAAGCGCTATCTAAAATTGATAAGCATATGGCTTTAAAAATAAG
AAATAACATTAGATCACTTGCAGCTAACCCTAGGCCATTGGGAGTAAAAAAAATTAAAGGTAATGATAACGCATATAGAA
TTCGTGTTGGTGACTATAGGATTATTTATGAAATTTATGACTCAAAAATTCTCATTTTGATTGTTAACGTGGGTCATAGG
AAAGAAGTATACGAATAA

Upstream 100 bases:

>100_bases
TGGATGATTCATCTTTAGGCAAGGCAAGGAAAGAGGTTGCAGATAATGGGGTTATCAGTTGGAAAGAGCTGGAACAAAGA
CTTGGTTGGGATAATTTGTA

Downstream 100 bases:

>100_bases
AAAAACAAAAAATCTAATACGTAAGAAATCTGTTATATTTTCGTCAAAAAAAAGCATTTTCCAACTATTCTAAACGTAGA
TGGCATAAATTTTAGAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Addiction Module xin RelE/StbE Family; Addiction Module Antitoxin; Addiction Module xin; Plasmid Stabilization System Protein Protein Like; Plasmid Stability Protein; Addiction Module xin RelE/StbE; RelE/StbE Family Addiction Module xin

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYRIIYEIYDSKILILIVNVGHR
KEVYE

Sequences:

>Translated_85_residues
MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYRIIYEIYDSKILILIVNVGHR
KEVYE
>Mature_85_residues
MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYRIIYEIYDSKILILIVNVGHR
KEVYE

Specific function: Unknown

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9984; Mature: 9984

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYR
CEEEEEECCCHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEE
IIYEIYDSKILILIVNVGHRKEVYE
EEEEEECCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MKYELFVNPRVEKALSKIDKHMALKIRNNIRSLAANPRPLGVKKIKGNDNAYRIRVGDYR
CEEEEEECCCHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEE
IIYEIYDSKILILIVNVGHRKEVYE
EEEEEECCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA