| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446623
Identifier: 46446623
GI number: 46446623
Start: 1183287
End: 1183535
Strand: Direct
Name: 46446623
Synonym: pc0989
Alternate gene names: NA
Gene position: 1183287-1183535 (Clockwise)
Preceding gene: 46446622
Following gene: 46446624
Centisome position: 49.01
GC content: 36.95
Gene sequence:
>249_bases ATGGAAAAACAATATAAAAAACTAAGCGTTGATTTCCCTATAGAAGAATATTCATACCTGAAAATGGCTTGCGTTAAGAA AGGAGTCTCTGTGAAAGACTTTGTCACTCAAGCTGTCATCATGTCAATTGAAGACTATGAAGATGAGTTGGATGATTCAT CTTTAGGCAAGGCAAGGAAAGAGGTTGCAGATAATGGGGTTATCAGTTGGAAAGAGCTGGAACAAAGACTTGGTTGGGAT AATTTGTAA
Upstream 100 bases:
>100_bases TGAATGCGATTTTGTAAGTGAGTGAGGTATTCCTCAAAAGAGGTTTGCATCTAAAAAGGAAAAACTCTATAATAAAAATA AATCACCAAGGAATTTTGTT
Downstream 100 bases:
>100_bases TGAAATATGAATTATTCGTTAACCCAAGGGTTGAAAAAGCGCTATCTAAAATTGATAAGCATATGGCTTTAAAAATAAGA AATAACATTAGATCACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MEKQYKKLSVDFPIEEYSYLKMACVKKGVSVKDFVTQAVIMSIEDYEDELDDSSLGKARKEVADNGVISWKELEQRLGWD NL
Sequences:
>Translated_82_residues MEKQYKKLSVDFPIEEYSYLKMACVKKGVSVKDFVTQAVIMSIEDYEDELDDSSLGKARKEVADNGVISWKELEQRLGWD NL >Mature_82_residues MEKQYKKLSVDFPIEEYSYLKMACVKKGVSVKDFVTQAVIMSIEDYEDELDDSSLGKARKEVADNGVISWKELEQRLGWD NL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9482; Mature: 9482
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQYKKLSVDFPIEEYSYLKMACVKKGVSVKDFVTQAVIMSIEDYEDELDDSSLGKARK CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EVADNGVISWKELEQRLGWDNL HHHCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MEKQYKKLSVDFPIEEYSYLKMACVKKGVSVKDFVTQAVIMSIEDYEDELDDSSLGKARK CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EVADNGVISWKELEQRLGWDNL HHHCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA