| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446619
Identifier: 46446619
GI number: 46446619
Start: 1181470
End: 1181733
Strand: Direct
Name: 46446619
Synonym: pc0985
Alternate gene names: NA
Gene position: 1181470-1181733 (Clockwise)
Preceding gene: 46446617
Following gene: 46446620
Centisome position: 48.93
GC content: 34.85
Gene sequence:
>264_bases TTGAGCAATTGCTCTGTTATAAATTTCCATAATTGCTTCTCGTTCAAATGTATGGCCACAATCGTCTACAATAGGATCTG TAAAAGGTTGAAGAGTAATAGGACAATCAAAACAACTAAGGCATTCCTCTACTACATCTTCTTCAACGGAAGGTGTGTGA CATTGCCCCGCAAAAAAGGTCCAACAAAAAGTAGAAAATCATGCTATCCTTTAAAAAAAGGAAAACAGTATGAAGAAAAG ATTCACAGAAGAACAAAACATTAA
Upstream 100 bases:
>100_bases GTGGTTACCTTTTCCTGTGCAATAGCTAGGCTATAATTTTTAACAAATTAGTAACATCTAGGACCTTGGTTGAGTCCAAA GGGCATATAAATGGTGTTTC
Downstream 100 bases:
>100_bases AATCCTAAAAGAAGTTGACTCTGTAATACCTCTTGCAGAAGTTTGTCGCAAGCACGGAGTCAGCACAGCTTCTTATTATA AATGGAAAGCAAAGTTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSNCSVINFHNCFSFKCMATIVYNRICKRLKSNRTIKTTKAFLYYIFFNGRCVTLPRKKGPTKSRKSCYPLKKGKQYEEK IHRRTKH
Sequences:
>Translated_87_residues MSNCSVINFHNCFSFKCMATIVYNRICKRLKSNRTIKTTKAFLYYIFFNGRCVTLPRKKGPTKSRKSCYPLKKGKQYEEK IHRRTKH >Mature_86_residues SNCSVINFHNCFSFKCMATIVYNRICKRLKSNRTIKTTKAFLYYIFFNGRCVTLPRKKGPTKSRKSCYPLKKGKQYEEKI HRRTKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10388; Mature: 10257
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNCSVINFHNCFSFKCMATIVYNRICKRLKSNRTIKTTKAFLYYIFFNGRCVTLPRKKG CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEEEEEEECCEEEECCCCCC PTKSRKSCYPLKKGKQYEEKIHRRTKH CCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SNCSVINFHNCFSFKCMATIVYNRICKRLKSNRTIKTTKAFLYYIFFNGRCVTLPRKKG CCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEEEEEEECCEEEECCCCCC PTKSRKSCYPLKKGKQYEEKIHRRTKH CCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA