| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446617
Identifier: 46446617
GI number: 46446617
Start: 1180462
End: 1180704
Strand: Direct
Name: 46446617
Synonym: pc0983
Alternate gene names: NA
Gene position: 1180462-1180704 (Clockwise)
Preceding gene: 46446616
Following gene: 46446619
Centisome position: 48.89
GC content: 39.51
Gene sequence:
>243_bases TTGAAAAACAAATGCAGGCGAGGCTTTCTCATGGTTAGTAAAAATAGGGCTTTTCTTCCTGCTTCTTTTCCCTTGTTAGG ATTGATGTGCCTCTTACTTCCTTCATGTGCTATTTATAAACAAAAATTTGATTGTCCGGCACCAAAGGGAATTCCTTGTA CATCTGTGACAGCTATCGAAAGCCTAATCATTGAAACCCAAGAAGGAGCTGATTTTCTCGTCTATCCCCCCATTGAAAGA TAA
Upstream 100 bases:
>100_bases GGCTTTTCAATTTTTGAAACAAGAGGATCATAACAAGCGGTTCCCTCTGTGGAGATAAACGCAGAGCTTTATCGTCAAGA AATTCCCAATCAAGCGTTCA
Downstream 100 bases:
>100_bases AAAGAATGAGGAAACAAACCAGGGGTTAGCAGCTCTGCCTCCTAGAGTGTGGATTTGCAATCAAGCTAAAGAAAAGATGG AGATAAAAGGTTATTATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKNKCRRGFLMVSKNRAFLPASFPLLGLMCLLLPSCAIYKQKFDCPAPKGIPCTSVTAIESLIIETQEGADFLVYPPIER
Sequences:
>Translated_80_residues MKNKCRRGFLMVSKNRAFLPASFPLLGLMCLLLPSCAIYKQKFDCPAPKGIPCTSVTAIESLIIETQEGADFLVYPPIER >Mature_80_residues MKNKCRRGFLMVSKNRAFLPASFPLLGLMCLLLPSCAIYKQKFDCPAPKGIPCTSVTAIESLIIETQEGADFLVYPPIER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8893; Mature: 8893
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKCRRGFLMVSKNRAFLPASFPLLGLMCLLLPSCAIYKQKFDCPAPKGIPCTSVTAIE CCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH SLIIETQEGADFLVYPPIER HHHHCCCCCCCEEEECCCCC >Mature Secondary Structure MKNKCRRGFLMVSKNRAFLPASFPLLGLMCLLLPSCAIYKQKFDCPAPKGIPCTSVTAIE CCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHH SLIIETQEGADFLVYPPIER HHHHCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA