| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446611
Identifier: 46446611
GI number: 46446611
Start: 1175632
End: 1176183
Strand: Reverse
Name: 46446611
Synonym: pc0977
Alternate gene names: NA
Gene position: 1176183-1175632 (Counterclockwise)
Preceding gene: 46446612
Following gene: 46446610
Centisome position: 48.71
GC content: 40.4
Gene sequence:
>552_bases TTGATAAAATTAGTAGGAAAAATTGGATTAGGAGTGATTTTAGTTCAAGGGTCTGCTTATGCTCAACCTTCTGTCACTTC GACATCACCATCGGCAGTATCCACACCTGTGCCAAATAGTAAAACACCTACACAAATAGTAAATCCAGTTCACGTATCTA ATAATCAAGCTCAATCAGCACAAGTCGATCAAAAGGCTTGGGCAGCTTGGATGATTGAAGCAGCTCAAGTCGCTAAAGAT TATGTCGAGACTCTGGATAAAGGGCAATATGCCCAGAGTTGGGAAAAAGGAGATACTCTTTTTCAACAAACAATTACTCA AAAAGAGTGGGAAACAACGCTAGATTTAGCAAGAAAGCGTTTAGGAGAAGTTCAATCTCGTACGCTGAAAGATGAAAAGC CAGCAATTGATCCCCATGGCCTTCCTAAAGGGTCTTATATGGTTATTGAGTACAACACTTCATTTGACAAGGCTCCTAAT TCAGGAGAGTTACTGACTCTTAGAAGAGGCACTGATGGCCAATGGAAAGTGTTGACCTATCAAGTCAACTAA
Upstream 100 bases:
>100_bases TAAGTGCTAATCCTAAAAATATTAAGGATTAGCACCTACCTTTTGAGGCTTGATGCTATTCTTAAAAAAATTTAAGGGAG ATAAGATGAATAAGGACAGT
Downstream 100 bases:
>100_bases AAGCTAAGTCTGCCACGCCACTTGTCTTGATGACAAGTGGGGTTATCATTAAAAAAATCATTAGGGCTTGTTTTAATTAG ATTTTCCTATCAGAATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MIKLVGKIGLGVILVQGSAYAQPSVTSTSPSAVSTPVPNSKTPTQIVNPVHVSNNQAQSAQVDQKAWAAWMIEAAQVAKD YVETLDKGQYAQSWEKGDTLFQQTITQKEWETTLDLARKRLGEVQSRTLKDEKPAIDPHGLPKGSYMVIEYNTSFDKAPN SGELLTLRRGTDGQWKVLTYQVN
Sequences:
>Translated_183_residues MIKLVGKIGLGVILVQGSAYAQPSVTSTSPSAVSTPVPNSKTPTQIVNPVHVSNNQAQSAQVDQKAWAAWMIEAAQVAKD YVETLDKGQYAQSWEKGDTLFQQTITQKEWETTLDLARKRLGEVQSRTLKDEKPAIDPHGLPKGSYMVIEYNTSFDKAPN SGELLTLRRGTDGQWKVLTYQVN >Mature_183_residues MIKLVGKIGLGVILVQGSAYAQPSVTSTSPSAVSTPVPNSKTPTQIVNPVHVSNNQAQSAQVDQKAWAAWMIEAAQVAKD YVETLDKGQYAQSWEKGDTLFQQTITQKEWETTLDLARKRLGEVQSRTLKDEKPAIDPHGLPKGSYMVIEYNTSFDKAPN SGELLTLRRGTDGQWKVLTYQVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20147; Mature: 20147
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLVGKIGLGVILVQGSAYAQPSVTSTSPSAVSTPVPNSKTPTQIVNPVHVSNNQAQSA CEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCHHH QVDQKAWAAWMIEAAQVAKDYVETLDKGQYAQSWEKGDTLFQQTITQKEWETTLDLARKR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEVQSRTLKDEKPAIDPHGLPKGSYMVIEYNTSFDKAPNSGELLTLRRGTDGQWKVLTY HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEE QVN EEC >Mature Secondary Structure MIKLVGKIGLGVILVQGSAYAQPSVTSTSPSAVSTPVPNSKTPTQIVNPVHVSNNQAQSA CEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCHHH QVDQKAWAAWMIEAAQVAKDYVETLDKGQYAQSWEKGDTLFQQTITQKEWETTLDLARKR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEVQSRTLKDEKPAIDPHGLPKGSYMVIEYNTSFDKAPNSGELLTLRRGTDGQWKVLTY HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEE QVN EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA