Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is yhbQ [C]

Identifier: 46446593

GI number: 46446593

Start: 1156232

End: 1156507

Strand: Direct

Name: yhbQ [C]

Synonym: pc0959

Alternate gene names: 46446593

Gene position: 1156232-1156507 (Clockwise)

Preceding gene: 46446590

Following gene: 46446595

Centisome position: 47.89

GC content: 32.25

Gene sequence:

>276_bases
ATGGAAATGACTGCTAACAACTGGGAAGTTTATATTATCCAAACGCGTTCTGGTAAACTTTATACAGGAATTACAAAAGA
TATTGAAAGGCGATTTAAAGAGCATCGCGAACAAGGCAAAGGAGCCCGTTTTTTTAAAATATCCGAACCAGAAAAAATCG
TATTTAGAGAAAAACAACTTAATCGATCTGAGGCTACTAAACGGGAGATTTCTATAAAAAAAATGAATCGTCAACAAAAA
ATAGAATTAATTGAGCATCAAACTCATGAAAATTAA

Upstream 100 bases:

>100_bases
GTGTAAAAAAATCTTCCGCTCTTGTCACTAGTAAAAATGAAAATTTTAATGGTATGCTAGATTGTTTATCTATTAATGTC
GCACTTTTTATCTAGGAAGT

Downstream 100 bases:

>100_bases
AAATATTCTTGTCTAATAATTGTATTAAAAAGAAGTTTTTGATCCTCTTGTTTGAAACACACAATTTCAACTGGTGCTAA
AGAATAGTTCCAAGCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MEMTANNWEVYIIQTRSGKLYTGITKDIERRFKEHREQGKGARFFKISEPEKIVFREKQLNRSEATKREISIKKMNRQQK
IELIEHQTHEN

Sequences:

>Translated_91_residues
MEMTANNWEVYIIQTRSGKLYTGITKDIERRFKEHREQGKGARFFKISEPEKIVFREKQLNRSEATKREISIKKMNRQQK
IELIEHQTHEN
>Mature_91_residues
MEMTANNWEVYIIQTRSGKLYTGITKDIERRFKEHREQGKGARFFKISEPEKIVFREKQLNRSEATKREISIKKMNRQQK
IELIEHQTHEN

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=38.961038961039, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 11036; Mature: 11036

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMTANNWEVYIIQTRSGKLYTGITKDIERRFKEHREQGKGARFFKISEPEKIVFREKQL
CCCCCCCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHC
NRSEATKREISIKKMNRQQKIELIEHQTHEN
CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEMTANNWEVYIIQTRSGKLYTGITKDIERRFKEHREQGKGARFFKISEPEKIVFREKQL
CCCCCCCCEEEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHC
NRSEATKREISIKKMNRQQKIELIEHQTHEN
CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA