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The map label for this gene is ybfM [H]

Identifier: 46446590

GI number: 46446590

Start: 1153758

End: 1154375

Strand: Direct

Name: ybfM [H]

Synonym: pc0956

Alternate gene names: 46446590

Gene position: 1153758-1154375 (Clockwise)

Preceding gene: 46446589

Following gene: 46446593

Centisome position: 47.79

GC content: 34.47

Gene sequence:

>618_bases
ATGGAACATGTCAATATTGATGCCTTAATACCATGGCTTGAGCAATATGGAGTTTTTGCTCTTTTTGCATTATTAGCTCT
TGGAATTATTGCTTTTCCCGTTCCAGAAGAAACACTTTTAGTTATCAGCGGAATTTTGATGAAAAATGGAAGTTTAAAAA
TTACAGAAACCATTATCGCTTGTTTGGGAGGAAGTGTTTGCGGAATTACTGCTAGTTATTTACTAGGCTTAAAAGCAGGC
ATCTATTTTTTTAATCGAACAGGAAAATGGTTTGGATTAACCCAAAAACATCTCGATAAAGCACATCAATGGTTTGAGCG
TTTTGGAAAATGGGCATTATTTATTGGTTATTTTATTCCGGGTGTCAGACATTTTACTGGATTTTCAGCAGGTATGTCCC
GTTTAGAATTTAAAGAATTTACTCTTTTCGCCTATAGCGGAGCCCTCGTTTGGGTTTCTAGCTTTCTCTCACTCGGCTAC
TTCTTTGGAGATTATGGCTTATCATTTTTCCATCATCTAGGGAAAGGTGATCAAACGACAATTTTTATCATTGTTTTATT
AACTTTAACCTATCTTGTCTATGCTTTTACAAAAAAAAGAAAAAGTACTGTGAATTAA

Upstream 100 bases:

>100_bases
ACTTCCAAAAGAAAATTAGCTAAAAATTTGATTAAGGAGTGTATTTACAAACATACTCCTTAACCTTTACTCTCTTTCCC
AGAACTTTAAAGGATTTTAA

Downstream 100 bases:

>100_bases
AAACCTACTATAGTCAAACCTAAGGCAATTATCACCCCTCATATTTTTAACTTTTTTAAATTGATATTGATCAAAATAAA
TAAAAGCTTGGCCATTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MEHVNIDALIPWLEQYGVFALFALLALGIIAFPVPEETLLVISGILMKNGSLKITETIIACLGGSVCGITASYLLGLKAG
IYFFNRTGKWFGLTQKHLDKAHQWFERFGKWALFIGYFIPGVRHFTGFSAGMSRLEFKEFTLFAYSGALVWVSSFLSLGY
FFGDYGLSFFHHLGKGDQTTIFIIVLLTLTYLVYAFTKKRKSTVN

Sequences:

>Translated_205_residues
MEHVNIDALIPWLEQYGVFALFALLALGIIAFPVPEETLLVISGILMKNGSLKITETIIACLGGSVCGITASYLLGLKAG
IYFFNRTGKWFGLTQKHLDKAHQWFERFGKWALFIGYFIPGVRHFTGFSAGMSRLEFKEFTLFAYSGALVWVSSFLSLGY
FFGDYGLSFFHHLGKGDQTTIFIIVLLTLTYLVYAFTKKRKSTVN
>Mature_205_residues
MEHVNIDALIPWLEQYGVFALFALLALGIIAFPVPEETLLVISGILMKNGSLKITETIIACLGGSVCGITASYLLGLKAG
IYFFNRTGKWFGLTQKHLDKAHQWFERFGKWALFIGYFIPGVRHFTGFSAGMSRLEFKEFTLFAYSGALVWVSSFLSLGY
FFGDYGLSFFHHLGKGDQTTIFIIVLLTLTYLVYAFTKKRKSTVN

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=152, Percent_Identity=30.9210526315789, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23028; Mature: 23028

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHVNIDALIPWLEQYGVFALFALLALGIIAFPVPEETLLVISGILMKNGSLKITETIIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
CLGGSVCGITASYLLGLKAGIYFFNRTGKWFGLTQKHLDKAHQWFERFGKWALFIGYFIP
HHCCCHHHHHHHHHHHHHHHHHEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GVRHFTGFSAGMSRLEFKEFTLFAYSGALVWVSSFLSLGYFFGDYGLSFFHHLGKGDQTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IFIIVLLTLTYLVYAFTKKRKSTVN
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEHVNIDALIPWLEQYGVFALFALLALGIIAFPVPEETLLVISGILMKNGSLKITETIIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
CLGGSVCGITASYLLGLKAGIYFFNRTGKWFGLTQKHLDKAHQWFERFGKWALFIGYFIP
HHCCCHHHHHHHHHHHHHHHHHEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GVRHFTGFSAGMSRLEFKEFTLFAYSGALVWVSSFLSLGYFFGDYGLSFFHHLGKGDQTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IFIIVLLTLTYLVYAFTKKRKSTVN
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]