Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446556

Identifier: 46446556

GI number: 46446556

Start: 1115098

End: 1116606

Strand: Direct

Name: 46446556

Synonym: pc0922

Alternate gene names: NA

Gene position: 1115098-1116606 (Clockwise)

Preceding gene: 46446555

Following gene: 46446557

Centisome position: 46.18

GC content: 31.01

Gene sequence:

>1509_bases
ATGATCAATTATTTTTGGAGCGAGCTAAGAGAAAGTGGAATTCACGTTCGAGATCAGTGGCAGTTTGAGCTAAAATCAGA
ATTTATGATTAATCAGACGCTGGTCAAAAATATTTATAAACAAGAATTTTATTTTTTTATTCCCAGTCCTTTACAAATTA
ATTCAGAGACCCTCACTAAGGCTCAATTTTTCTCTGATCAAACAAATTTGATTCGTTATAAAACGCCTCGGATGAGTTTA
TCTGAATTAATCGATCTTTCATATTCTTCCTCGCCTCTTAATCGCTTACAACTAATTATCGAAGCTAATTTAACAAATCA
AAAAAGTATTATCGATGAATTGCAACTATTTGCAAATATTTTCAAAACAGCTTTGAGAGATCGAATTTTTCACATTTCAC
AAAGCTTAGAAAAAATGGAAAATCAAACGATGATTCTTTATTCTTCCATCATCGAAGAGCTTACTAAACAAGTTCAACAA
GTCACATTTCACTATCGTGAAATACAAAAGAAACTCTTACACAATTCTTCTTCTCAAATTAATTATGCTTGTAAGTATGT
AGATGAATTTATCAGTCACACAATTGATGAATATTTCCTTATTCTTCTTAAACAATTTACTCAAAATGATAAAAGTGACA
TTCATGTAAAAAAAGAATTGGCTAGACATATAGCAAAAGAAAAAGAGTATCGAAGAGAATGCAAATTAGAATCGAAGTCA
AATGATGAGCAAAATAATGAATCCATTTTATATCGGCAAGGATTGCTCAATCGATTTATGCTTGAATCACTCATGCTAAA
AAGTTATCGCGCTTCTCTCGAAGAAAAGCATGGAAACATTTTAGGCGGTGTAGCTGCAGGAATTGCTATGTTTGTCTATA
TGATTTTATTTGTTTGGAAAATTTCCGTTTTTGTCATCAATTCTTTCCCTTTTATTATGTTTGCCGTGTTTTTTTATATT
TTAAAAGATCGTATCAAAGAAGGACTAAAAAAAATTTATTATAAAAAGGCTTCTCGGTGGTTTCCTGATTATTCAACAGA
AATCAAAACACAAAATGAAAAAAAAATCGGCCATTTAACAGAAAATTTTGCTTTTATTGAACCATCTCAATTACCTCCCG
ATTTTTTGGAAATTCGGAATCATCATTTTCACGAAGAACTTCAAGCTTTAAATCGACATGAATCTATTCTTCATTACAAA
AGAGAAGTCTCTCTCTATTATCAACCCAGCCATTTACAAAGAAGAAGAAAAGAGTTAACAACCATCTTTAGACTCAATAT
TCAACGATTTGTGCAAAAAGCTAGTAATGCGTTGCAGCCAAACTTGACTCTTAACCTTTCTACTGAAGAAATTCAAGAGC
GGTTATTACCTAAAGTTTACCATCTCAATATTATTATTCGAAATACCTATCAACAACCCGATTTCACTTATAAAAGTGAG
ATAGAAACTTTTCGTGTTGTTGTTGATAAGGTCGGTATTAAACGAGTCGAACAAATTAACCAAAATTAA

Upstream 100 bases:

>100_bases
GGTTTGCGGAGAACTTAATAAAGATATGACGCATATGACTCCCGATGAAATAATGACTCATCTTCCTTTTTTTAATTAAA
TATTCGAAAAGCAATGAAAA

Downstream 100 bases:

>100_bases
TCCATGCGTAAAGAGCCTCTCAATTTATCTCATCAAACTCTTTTAACGCAAAAATTTCGGCAGATGAGTTTAGTAATTTC
TGAATATTCTTTCGCAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MINYFWSELRESGIHVRDQWQFELKSEFMINQTLVKNIYKQEFYFFIPSPLQINSETLTKAQFFSDQTNLIRYKTPRMSL
SELIDLSYSSSPLNRLQLIIEANLTNQKSIIDELQLFANIFKTALRDRIFHISQSLEKMENQTMILYSSIIEELTKQVQQ
VTFHYREIQKKLLHNSSSQINYACKYVDEFISHTIDEYFLILLKQFTQNDKSDIHVKKELARHIAKEKEYRRECKLESKS
NDEQNNESILYRQGLLNRFMLESLMLKSYRASLEEKHGNILGGVAAGIAMFVYMILFVWKISVFVINSFPFIMFAVFFYI
LKDRIKEGLKKIYYKKASRWFPDYSTEIKTQNEKKIGHLTENFAFIEPSQLPPDFLEIRNHHFHEELQALNRHESILHYK
REVSLYYQPSHLQRRRKELTTIFRLNIQRFVQKASNALQPNLTLNLSTEEIQERLLPKVYHLNIIIRNTYQQPDFTYKSE
IETFRVVVDKVGIKRVEQINQN

Sequences:

>Translated_502_residues
MINYFWSELRESGIHVRDQWQFELKSEFMINQTLVKNIYKQEFYFFIPSPLQINSETLTKAQFFSDQTNLIRYKTPRMSL
SELIDLSYSSSPLNRLQLIIEANLTNQKSIIDELQLFANIFKTALRDRIFHISQSLEKMENQTMILYSSIIEELTKQVQQ
VTFHYREIQKKLLHNSSSQINYACKYVDEFISHTIDEYFLILLKQFTQNDKSDIHVKKELARHIAKEKEYRRECKLESKS
NDEQNNESILYRQGLLNRFMLESLMLKSYRASLEEKHGNILGGVAAGIAMFVYMILFVWKISVFVINSFPFIMFAVFFYI
LKDRIKEGLKKIYYKKASRWFPDYSTEIKTQNEKKIGHLTENFAFIEPSQLPPDFLEIRNHHFHEELQALNRHESILHYK
REVSLYYQPSHLQRRRKELTTIFRLNIQRFVQKASNALQPNLTLNLSTEEIQERLLPKVYHLNIIIRNTYQQPDFTYKSE
IETFRVVVDKVGIKRVEQINQN
>Mature_502_residues
MINYFWSELRESGIHVRDQWQFELKSEFMINQTLVKNIYKQEFYFFIPSPLQINSETLTKAQFFSDQTNLIRYKTPRMSL
SELIDLSYSSSPLNRLQLIIEANLTNQKSIIDELQLFANIFKTALRDRIFHISQSLEKMENQTMILYSSIIEELTKQVQQ
VTFHYREIQKKLLHNSSSQINYACKYVDEFISHTIDEYFLILLKQFTQNDKSDIHVKKELARHIAKEKEYRRECKLESKS
NDEQNNESILYRQGLLNRFMLESLMLKSYRASLEEKHGNILGGVAAGIAMFVYMILFVWKISVFVINSFPFIMFAVFFYI
LKDRIKEGLKKIYYKKASRWFPDYSTEIKTQNEKKIGHLTENFAFIEPSQLPPDFLEIRNHHFHEELQALNRHESILHYK
REVSLYYQPSHLQRRRKELTTIFRLNIQRFVQKASNALQPNLTLNLSTEEIQERLLPKVYHLNIIIRNTYQQPDFTYKSE
IETFRVVVDKVGIKRVEQINQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60036; Mature: 60036

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYFWSELRESGIHVRDQWQFELKSEFMINQTLVKNIYKQEFYFFIPSPLQINSETLTK
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECHHHHHH
AQFFSDQTNLIRYKTPRMSLSELIDLSYSSSPLNRLQLIIEANLTNQKSIIDELQLFANI
HHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHEEHEEECCCCHHHHHHHHHHHHHH
FKTALRDRIFHISQSLEKMENQTMILYSSIIEELTKQVQQVTFHYREIQKKLLHNSSSQI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
NYACKYVDEFISHTIDEYFLILLKQFTQNDKSDIHVKKELARHIAKEKEYRRECKLESKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NDEQNNESILYRQGLLNRFMLESLMLKSYRASLEEKHGNILGGVAAGIAMFVYMILFVWK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ISVFVINSFPFIMFAVFFYILKDRIKEGLKKIYYKKASRWFPDYSTEIKTQNEKKIGHLT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ENFAFIEPSQLPPDFLEIRNHHFHEELQALNRHESILHYKREVSLYYQPSHLQRRRKELT
HCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHH
TIFRLNIQRFVQKASNALQPNLTLNLSTEEIQERLLPKVYHLNIIIRNTYQQPDFTYKSE
HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHEEEEEEECCCCCCCCHHHH
IETFRVVVDKVGIKRVEQINQN
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINYFWSELRESGIHVRDQWQFELKSEFMINQTLVKNIYKQEFYFFIPSPLQINSETLTK
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECHHHHHH
AQFFSDQTNLIRYKTPRMSLSELIDLSYSSSPLNRLQLIIEANLTNQKSIIDELQLFANI
HHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHEEHEEECCCCHHHHHHHHHHHHHH
FKTALRDRIFHISQSLEKMENQTMILYSSIIEELTKQVQQVTFHYREIQKKLLHNSSSQI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
NYACKYVDEFISHTIDEYFLILLKQFTQNDKSDIHVKKELARHIAKEKEYRRECKLESKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NDEQNNESILYRQGLLNRFMLESLMLKSYRASLEEKHGNILGGVAAGIAMFVYMILFVWK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ISVFVINSFPFIMFAVFFYILKDRIKEGLKKIYYKKASRWFPDYSTEIKTQNEKKIGHLT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ENFAFIEPSQLPPDFLEIRNHHFHEELQALNRHESILHYKREVSLYYQPSHLQRRRKELT
HCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHH
TIFRLNIQRFVQKASNALQPNLTLNLSTEEIQERLLPKVYHLNIIIRNTYQQPDFTYKSE
HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHEEEEEEECCCCCCCCHHHH
IETFRVVVDKVGIKRVEQINQN
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA