| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446552
Identifier: 46446552
GI number: 46446552
Start: 1112066
End: 1113019
Strand: Reverse
Name: 46446552
Synonym: pc0918
Alternate gene names: NA
Gene position: 1113019-1112066 (Counterclockwise)
Preceding gene: 46446553
Following gene: 46446551
Centisome position: 46.1
GC content: 36.9
Gene sequence:
>954_bases TTGTATTTCAAGCAATCCCCTGAGATTTTAAAAAACTTACAGCAAGTTGCGGCCATTGAGTCGAGTGAATCATCTAATCG ATTAGAAGGAATTACAGCTCCGCATAATCGAATTGCTGATTTAGTGACTAAAAATAGCGCTCCCATTGACCGGTCAGAAC AAGAAATTGCCGGTTATCGTGACGCTTTGAATTTGATTCATCAATCTGGCCAATACATGCGTTTAACAAATAATGTAATT TTACAGTTACATAGTTGGCTTTATCGCTATCAATCCCAGAGTGGGGGACAGTGGAAAAAATTAGACAATCAAATTACAGA AATCCATTCAGATGGGACAAAACGTATACGCTTTAATCCAACATCTGCTTTTGAAACTCCAAGTGCAATGCATGCATTAA TTGAAGGATATGAAACAAACATTCAATCTATTCAAAAAGAGCCGTTGATTATTTTGCCTGTGACAATTTTAGATTTTTTA TGCATCCATCCTTTTAGTGATGGAAATGGAAGAACTGCTCGATTACTCACTTTATTACTTTTATATCATTTTGATTATCA AGTAGGCCGTTATATTAGTTTAGAACGCATTTTTGAAGAATCTAAAGAAAGTTATTATGCAACACTAGAAAAAAGTTCCA AAGGTTGGCATGAAGGAAAGCATGATGTGATGCCTTGGATGACATATTTTTGGGGAGTGCTTTTAAGAGCCTATAACGAA TTTGAAGCTCGTGTAGGAACACTAAAAATTGGTCAAGGCAGCAAAAATGCTTATATTCGTCAAACTGCTGAAAGAATGAT AGGCCCCTTTGCCATTTCGGATATTGAAAAGGCTTGTCCTGCTGTCAGTCGAGATACAATTCGCCTAGTTTTAAGACAAC TAAGAGATGAAGGAATCATTATCCCTCAAGGTAAGGGACGGGGAGCAAAATGGAAACTTGCCAACTCTTCCTAA
Upstream 100 bases:
>100_bases TATGCATTCATTATCCCTTAGTTATTTAAATTCGCTTCGCTTTTCAGAAGAACATCTGTCAACTTTGCGTTTACTTGGTG AATATCGAGGAAAGCAGGCT
Downstream 100 bases:
>100_bases TGAATAGAAGAACGAAGATCAACTAAAAAATATTGCACAATTACGAGTATACGAAATGATTTGTCCCTAAGCTTTTCTAA GTAAGTTCAATAACTGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Family Protein; AsnC Family Regulatory Protein; Fic Protein Family; Regulation Factor CAMP
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MYFKQSPEILKNLQQVAAIESSESSNRLEGITAPHNRIADLVTKNSAPIDRSEQEIAGYRDALNLIHQSGQYMRLTNNVI LQLHSWLYRYQSQSGGQWKKLDNQITEIHSDGTKRIRFNPTSAFETPSAMHALIEGYETNIQSIQKEPLIILPVTILDFL CIHPFSDGNGRTARLLTLLLLYHFDYQVGRYISLERIFEESKESYYATLEKSSKGWHEGKHDVMPWMTYFWGVLLRAYNE FEARVGTLKIGQGSKNAYIRQTAERMIGPFAISDIEKACPAVSRDTIRLVLRQLRDEGIIIPQGKGRGAKWKLANSS
Sequences:
>Translated_317_residues MYFKQSPEILKNLQQVAAIESSESSNRLEGITAPHNRIADLVTKNSAPIDRSEQEIAGYRDALNLIHQSGQYMRLTNNVI LQLHSWLYRYQSQSGGQWKKLDNQITEIHSDGTKRIRFNPTSAFETPSAMHALIEGYETNIQSIQKEPLIILPVTILDFL CIHPFSDGNGRTARLLTLLLLYHFDYQVGRYISLERIFEESKESYYATLEKSSKGWHEGKHDVMPWMTYFWGVLLRAYNE FEARVGTLKIGQGSKNAYIRQTAERMIGPFAISDIEKACPAVSRDTIRLVLRQLRDEGIIIPQGKGRGAKWKLANSS >Mature_317_residues MYFKQSPEILKNLQQVAAIESSESSNRLEGITAPHNRIADLVTKNSAPIDRSEQEIAGYRDALNLIHQSGQYMRLTNNVI LQLHSWLYRYQSQSGGQWKKLDNQITEIHSDGTKRIRFNPTSAFETPSAMHALIEGYETNIQSIQKEPLIILPVTILDFL CIHPFSDGNGRTARLLTLLLLYHFDYQVGRYISLERIFEESKESYYATLEKSSKGWHEGKHDVMPWMTYFWGVLLRAYNE FEARVGTLKIGQGSKNAYIRQTAERMIGPFAISDIEKACPAVSRDTIRLVLRQLRDEGIIIPQGKGRGAKWKLANSS
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36223; Mature: 36223
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFKQSPEILKNLQQVAAIESSESSNRLEGITAPHNRIADLVTKNSAPIDRSEQEIAGYR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH DALNLIHQSGQYMRLTNNVILQLHSWLYRYQSQSGGQWKKLDNQITEIHSDGTKRIRFNP HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECC TSAFETPSAMHALIEGYETNIQSIQKEPLIILPVTILDFLCIHPFSDGNGRTARLLTLLL CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH LYHFDYQVGRYISLERIFEESKESYYATLEKSSKGWHEGKHDVMPWMTYFWGVLLRAYNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FEARVGTLKIGQGSKNAYIRQTAERMIGPFAISDIEKACPAVSRDTIRLVLRQLRDEGII HHHHHCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEE IPQGKGRGAKWKLANSS EECCCCCCCEEEECCCC >Mature Secondary Structure MYFKQSPEILKNLQQVAAIESSESSNRLEGITAPHNRIADLVTKNSAPIDRSEQEIAGYR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH DALNLIHQSGQYMRLTNNVILQLHSWLYRYQSQSGGQWKKLDNQITEIHSDGTKRIRFNP HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECC TSAFETPSAMHALIEGYETNIQSIQKEPLIILPVTILDFLCIHPFSDGNGRTARLLTLLL CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH LYHFDYQVGRYISLERIFEESKESYYATLEKSSKGWHEGKHDVMPWMTYFWGVLLRAYNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FEARVGTLKIGQGSKNAYIRQTAERMIGPFAISDIEKACPAVSRDTIRLVLRQLRDEGII HHHHHCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEE IPQGKGRGAKWKLANSS EECCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA