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The map label for this gene is czcD [H]

Identifier: 46446548

GI number: 46446548

Start: 1106613

End: 1107554

Strand: Reverse

Name: czcD [H]

Synonym: pc0914

Alternate gene names: 46446548

Gene position: 1107554-1106613 (Counterclockwise)

Preceding gene: 46446549

Following gene: 46446547

Centisome position: 45.87

GC content: 37.9

Gene sequence:

>942_bases
ATGGCAAAATTTCCCAAACCCGTTTTTCTTCCAGCGGATGTTTATCTCAAAAGAGCTCAACGCAGTCAACTTATTCTTCG
ATCTGCTAAATTGGGAATAAAAATACGACTAGCTATTATTGTTTTTGAACTTTTTGGTGTAGCGTTGATCAATAGCTCTA
CTCTTTTCTTAGATGCTATTTCCGGTTTAATGGATGTTCTATCGACTATTTTTTTGATTATATGCATAAAATTAGCTCGT
AAACCACCTGATGAAGATCATCCTTTTGGACATGGTCGCTATGAACCTTTAGGTGGTCTTTTAATTGGCTTAATTTTAAT
TTTTATTGGAGCCATTATGTTGTTCCAACAAGTCAATGGATTTATTCAGGAAGCTCCTCAACCTTTTTTACATCCCTGGG
CTTGGATTTTTCCTGCTACAGCTATGATTCTTTTAGAAATTTGTTATCAGTTAATTTTTAGAACGGCAAAAAACGAAAAT
AGTCCAGCTCTAGCTGCAGACGCGGTCCATTATCGAATAGATGGGTTAACAAGCCTATTGGCAACTTTAACATTAATTGC
AGCTGCCTTGGTTCCTGAATGGAGCGGAATCGTTGACCATATAGGAGCTATTCTGATTGCTTTATTTATGATAGGTCTTG
GGGTTTTTGCTGCACGTGAAAACTTTAATCAACTAACAGATAAAGTCCCTAATCAAGAGTTTTTTAAAACCGTCAAAAAA
GCTGCGCATGAAGTAGAAGGAGTGCAAGCGACAGAAAAAATTCGCATTCAACTTTATGGTCCAGACGCTCATGTGGATAT
CGATGTTGAAGTGGAACCAAAACTTACAGTTGATTTCGCACATCAAATTAGTCAACAAGTACGCGCAGCTATTCAAAAAG
CTTGGCCAGCAGTTCGAGATGTGACTGTTCACATCGAACCTTACTATCCAGGGGATCATTAG

Upstream 100 bases:

>100_bases
ATGATGTTTTAGTTGTTGTGGGTGAAAAGACGCCTTTAAAGCAAGCACTAGAATTATTTGGAAAATTAGAAAAACAATCG
ACTATTAATTAAAGGTTTTC

Downstream 100 bases:

>100_bases
ATTGTGCCGGAGTTGAAAAATAATAAAAGAACTAGGCATGATAAAATAGACGAATTAGGTAATTTGATGAAATTTTGGCA
AATCTTGGATAAGTTTTTGG

Product: putative cation efflux system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MAKFPKPVFLPADVYLKRAQRSQLILRSAKLGIKIRLAIIVFELFGVALINSSTLFLDAISGLMDVLSTIFLIICIKLAR
KPPDEDHPFGHGRYEPLGGLLIGLILIFIGAIMLFQQVNGFIQEAPQPFLHPWAWIFPATAMILLEICYQLIFRTAKNEN
SPALAADAVHYRIDGLTSLLATLTLIAAALVPEWSGIVDHIGAILIALFMIGLGVFAARENFNQLTDKVPNQEFFKTVKK
AAHEVEGVQATEKIRIQLYGPDAHVDIDVEVEPKLTVDFAHQISQQVRAAIQKAWPAVRDVTVHIEPYYPGDH

Sequences:

>Translated_313_residues
MAKFPKPVFLPADVYLKRAQRSQLILRSAKLGIKIRLAIIVFELFGVALINSSTLFLDAISGLMDVLSTIFLIICIKLAR
KPPDEDHPFGHGRYEPLGGLLIGLILIFIGAIMLFQQVNGFIQEAPQPFLHPWAWIFPATAMILLEICYQLIFRTAKNEN
SPALAADAVHYRIDGLTSLLATLTLIAAALVPEWSGIVDHIGAILIALFMIGLGVFAARENFNQLTDKVPNQEFFKTVKK
AAHEVEGVQATEKIRIQLYGPDAHVDIDVEVEPKLTVDFAHQISQQVRAAIQKAWPAVRDVTVHIEPYYPGDH
>Mature_312_residues
AKFPKPVFLPADVYLKRAQRSQLILRSAKLGIKIRLAIIVFELFGVALINSSTLFLDAISGLMDVLSTIFLIICIKLARK
PPDEDHPFGHGRYEPLGGLLIGLILIFIGAIMLFQQVNGFIQEAPQPFLHPWAWIFPATAMILLEICYQLIFRTAKNENS
PALAADAVHYRIDGLTSLLATLTLIAAALVPEWSGIVDHIGAILIALFMIGLGVFAARENFNQLTDKVPNQEFFKTVKKA
AHEVEGVQATEKIRIQLYGPDAHVDIDVEVEPKLTVDFAHQISQQVRAAIQKAWPAVRDVTVHIEPYYPGDH

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=274, Percent_Identity=24.4525547445255, Blast_Score=75, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI115533508, Length=288, Percent_Identity=21.5277777777778, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI115533506, Length=288, Percent_Identity=21.5277777777778, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6325032, Length=221, Percent_Identity=23.0769230769231, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 34775; Mature: 34644

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFPKPVFLPADVYLKRAQRSQLILRSAKLGIKIRLAIIVFELFGVALINSSTLFLDAI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SGLMDVLSTIFLIICIKLARKPPDEDHPFGHGRYEPLGGLLIGLILIFIGAIMLFQQVNG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIQEAPQPFLHPWAWIFPATAMILLEICYQLIFRTAKNENSPALAADAVHYRIDGLTSLL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ATLTLIAAALVPEWSGIVDHIGAILIALFMIGLGVFAARENFNQLTDKVPNQEFFKTVKK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAHEVEGVQATEKIRIQLYGPDAHVDIDVEVEPKLTVDFAHQISQQVRAAIQKAWPAVRD
HHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHE
VTVHIEPYYPGDH
EEEEEECCCCCCC
>Mature Secondary Structure 
AKFPKPVFLPADVYLKRAQRSQLILRSAKLGIKIRLAIIVFELFGVALINSSTLFLDAI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SGLMDVLSTIFLIICIKLARKPPDEDHPFGHGRYEPLGGLLIGLILIFIGAIMLFQQVNG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIQEAPQPFLHPWAWIFPATAMILLEICYQLIFRTAKNENSPALAADAVHYRIDGLTSLL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ATLTLIAAALVPEWSGIVDHIGAILIALFMIGLGVFAARENFNQLTDKVPNQEFFKTVKK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAHEVEGVQATEKIRIQLYGPDAHVDIDVEVEPKLTVDFAHQISQQVRAAIQKAWPAVRD
HHHHHHCCCCCEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHE
VTVHIEPYYPGDH
EEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]