Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446540

Identifier: 46446540

GI number: 46446540

Start: 1097384

End: 1098700

Strand: Direct

Name: 46446540

Synonym: pc0906

Alternate gene names: NA

Gene position: 1097384-1098700 (Clockwise)

Preceding gene: 46446538

Following gene: 46446544

Centisome position: 45.45

GC content: 32.5

Gene sequence:

>1317_bases
ATGTCAACAATTCTCATTTACACACCTAACGTTGTTCATTCAAAAATGGCAGGGCCTGCAATTCGTTGTTGGGAGCTTGC
GAAAGCTTTAAGTTCATCTCATCATGTTATTTTAGTTATTCCTAATCAAACAGAAATGCAAGGAGAAGGATTTCAAATTA
TTGCAAAACAAAGCTCTGAATTAAAGCAGTGGATTAAAAAGGCAAAAATATTAATTGCACAAAATTTAACTATATCCATG
GCATGGCATGCTAAGAAAAACGGAATTAAAATTATTATCGATGCTTATGATCCCCTACCCCTAGAAATTTTAGAACTTTT
TAAAAACGATATCGTTGCCAAAAGAAAAGAAAGTTTAAACTCTTCTCTTAATCAACTTATTTTTAACTTTAAAATGACCG
ACGGAATTCTTTGTGCAAGCGAAAAACAAAGAGATTTATGGATAGGATTTTTACTAAGCCAAAAATTAATTACGCTTTCT
CGCTATGATCAAGATAAAGGCTTAAGGCAATTTATTGATGTCGTCCCTTTTGGCCTTCCAAACAAAATAGCTAAAAAGGA
TGGACCAGGGCTTAAAGAAAAATATTCCTTTAATTCTAAAGATAAAATTCTTTTATGGGGAGGAGGAATTTGGAATTGGT
TTGACCCATTAACCCTTATCAAAGCTGTCAAAAAACTTAGCATGACAAGATCGGATATCAAGCTTGTTTTCCTGGGAATT
AAGAATCCGGATCCTTCAGTTCCTGAAATGGAGATGGCTTCAAAAGCTATTAAACTTGCTGAAGAATTAAATATTTTAGA
TCGTCATGTATTTTTTAACCATGACTGGATTCCTTATAATGAAAGACATAATAGTTTTTTGGACGCCACAATTGGTGTTT
CTACTCACTTTGACCATTTAGAAACCCGATATTCTTTTCGAACAAGAATGTTAGATTATATTTGGACTGAACTTCCCATT
TTAGCGACCGAAGGTGACTCTTTTGCGGAATTGATTGAACAAAATAAACTGGGAATTACGATTTCTTATAACGATGAGGA
ATCTTTAATAAATGCCATTACCTTAATGGTTGATCACCCAGATTTAATAGCCGAATTTCAAAATCAATTAAGATCTATTC
GTCCTTTGTTTTATTGGAACAAAATTATTGAACCGATCAACCATATGATAGCGAATTTTGATAAGACGCCTAATCCATCC
ATGAATTTTGAAGTGATCAAAATATTGACAACTTTTGTTATCCATCAAGTTTATGAAAAAGGCTTTAAAAATACAGCCAA
AATTATTTTAAGGAAAATGTTCAATAAATGGAGATAG

Upstream 100 bases:

>100_bases
AAATTAAAAATAAAAAAACTTTTTTGTTTATATGCGAGTAGAATTTGTCAAAATATCAAATTTTTTATAATCTGTGATGA
AAATTTAAAGGTTCGAAGCC

Downstream 100 bases:

>100_bases
AAAAGAATGAATAATTAAATTTTTGATTGTTTCTTCAGCGAATAATTTTCAAAAAATTGCTTATCAAGCCAGCTAGACAT
TTCCACATCTTCAATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Glycosyltransferase; Diverged Glycosyltransferase Domain-Containing Protein; Glycosyl Transferase Family Protein; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSTILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSELKQWIKKAKILIAQNLTISM
AWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLNSSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLS
RYDQDKGLRQFIDVVPFGLPNKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI
KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHLETRYSFRTRMLDYIWTELPI
LATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHPDLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPS
MNFEVIKILTTFVIHQVYEKGFKNTAKIILRKMFNKWR

Sequences:

>Translated_438_residues
MSTILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSELKQWIKKAKILIAQNLTISM
AWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLNSSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLS
RYDQDKGLRQFIDVVPFGLPNKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI
KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHLETRYSFRTRMLDYIWTELPI
LATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHPDLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPS
MNFEVIKILTTFVIHQVYEKGFKNTAKIILRKMFNKWR
>Mature_437_residues
STILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSELKQWIKKAKILIAQNLTISMA
WHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLNSSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLSR
YDQDKGLRQFIDVVPFGLPNKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGIK
NPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHLETRYSFRTRMLDYIWTELPIL
ATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHPDLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPSM
NFEVIKILTTFVIHQVYEKGFKNTAKIILRKMFNKWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50590; Mature: 50458

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSE
CCEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHH
LKQWIKKAKILIAQNLTISMAWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLN
HHHHHHHHHEEEEECCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLSRYDQDKGLRQFIDVVPFGLP
HHHHHHHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
NKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI
CHHHCCCCCCCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCHHHH
ETRYSFRTRMLDYIWTELPILATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHP
HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCH
DLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPSMNFEVIKILTTFVIHQVYEK
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GFKNTAKIILRKMFNKWR
HCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STILIYTPNVVHSKMAGPAIRCWELAKALSSSHHVILVIPNQTEMQGEGFQIIAKQSSE
CEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHH
LKQWIKKAKILIAQNLTISMAWHAKKNGIKIIIDAYDPLPLEILELFKNDIVAKRKESLN
HHHHHHHHHEEEEECCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SSLNQLIFNFKMTDGILCASEKQRDLWIGFLLSQKLITLSRYDQDKGLRQFIDVVPFGLP
HHHHHHHHEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
NKIAKKDGPGLKEKYSFNSKDKILLWGGGIWNWFDPLTLIKAVKKLSMTRSDIKLVFLGI
CHHHCCCCCCCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
KNPDPSVPEMEMASKAIKLAEELNILDRHVFFNHDWIPYNERHNSFLDATIGVSTHFDHL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEECCCCCHHHH
ETRYSFRTRMLDYIWTELPILATEGDSFAELIEQNKLGITISYNDEESLINAITLMVDHP
HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCH
DLIAEFQNQLRSIRPLFYWNKIIEPINHMIANFDKTPNPSMNFEVIKILTTFVIHQVYEK
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GFKNTAKIILRKMFNKWR
HCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA