Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446537

Identifier: 46446537

GI number: 46446537

Start: 1093491

End: 1094006

Strand: Reverse

Name: 46446537

Synonym: pc0903

Alternate gene names: NA

Gene position: 1094006-1093491 (Counterclockwise)

Preceding gene: 46446539

Following gene: 46446536

Centisome position: 45.31

GC content: 44.96

Gene sequence:

>516_bases
ATGCTTAAATGTGCTACTCTTCTAAGCTCATCAATGGAGCATCTTATGGAAGCGCACAGAAGACATGATATATCCGACAG
AGTTTGGAATTTACTGGGACCTCATTTGCCAGGAAGAAGAGGGACTTGGGGTGGTATAGCAAGAGATAATAGGACTTTTA
TCAATGCAGTATTTTGGATATTAAGAACGGGAGCTCCATGGAGGGATTTGCCTCCAGATTACGGTTGTTGGAGCAATACT
CATCGGCGATTTATCCGATGGCGCAATCAGAGAGTCTGGGAAAGGTTGCTTGAGGTGCTGATTGACGATCCAGATTATGA
ATGGCTTGTGATAGATGCTTCGCATTGTAAAGTGCATCCTCATGCAGCGGGAGCTAAAGGTGGTAATCAGAGCATGAGTC
GTACAAAAGGGGGCTCAATACAAAATTGCATCTTGCCGTGGATGCGCATGGTCTGCCGATCAGGGTCATTATTACAGAAG
GCACAACAGCAGATTGTACTCAAGCAAGCAATTTGA

Upstream 100 bases:

>100_bases
ATTTGCTTATTAAAGCCAAATCGCTCTTATATTAACTTTGCCGACAATACCTAAATGAGAATGCAAACCCTAGATAGTGT
AGTCACGAGAAATGAAATAA

Downstream 100 bases:

>100_bases
TCGCTGGTCTTACAGCTGAGTGGTTACTGGCAGACAAAGGATATGATAGCGACGCAATCGTTGAGCAAGCTATAAGTCAG
GGAATGCAAGTAGTGATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLKCATLLSSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGTWGGIARDNRTFINAVFWILRTGAPWRDLPPDYGCWSNT
HRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHPHAAGAKGGNQSMSRTKGGSIQNCILPWMRMVCRSGSLLQK
AQQQIVLKQAI

Sequences:

>Translated_171_residues
MLKCATLLSSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGTWGGIARDNRTFINAVFWILRTGAPWRDLPPDYGCWSNT
HRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHPHAAGAKGGNQSMSRTKGGSIQNCILPWMRMVCRSGSLLQK
AQQQIVLKQAI
>Mature_171_residues
MLKCATLLSSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGTWGGIARDNRTFINAVFWILRTGAPWRDLPPDYGCWSNT
HRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHPHAAGAKGGNQSMSRTKGGSIQNCILPWMRMVCRSGSLLQK
AQQQIVLKQAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To transposase of insertion sequence IS6501 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19774; Mature: 19774

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKCATLLSSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGTWGGIARDNRTFINAVFWI
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LRTGAPWRDLPPDYGCWSNTHRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHP
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECC
HAAGAKGGNQSMSRTKGGSIQNCILPWMRMVCRSGSLLQKAQQQIVLKQAI
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKCATLLSSSMEHLMEAHRRHDISDRVWNLLGPHLPGRRGTWGGIARDNRTFINAVFWI
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LRTGAPWRDLPPDYGCWSNTHRRFIRWRNQRVWERLLEVLIDDPDYEWLVIDASHCKVHP
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECC
HAAGAKGGNQSMSRTKGGSIQNCILPWMRMVCRSGSLLQKAQQQIVLKQAI
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8190622 [H]