| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446521
Identifier: 46446521
GI number: 46446521
Start: 1071450
End: 1071836
Strand: Direct
Name: 46446521
Synonym: pc0887
Alternate gene names: NA
Gene position: 1071450-1071836 (Clockwise)
Preceding gene: 46446520
Following gene: 46446522
Centisome position: 44.38
GC content: 38.5
Gene sequence:
>387_bases ATGTTTAACCGTCTTCCTTCTGATTTTCCTGAAAGCTTGTTAAAAAGTGGTGTGATTACTTTTGCCATTGATGCACTTAT TTATGGCAATGCCGAGCAAGCACTAGCTGTTAGTGGCACTGCAGTTGTTGCAACGTTAATTAGTGCACTAACCACTCCCT TATTTCGCAAAATGTTTGCTGCTGAGCAACATGCAACTGTGACTTGGTACCATTCAGCGGTTCAAATTGCGACAAGCATT GCTTTGAGCCAGGTATTAATTAATACTTTTTCTCATTATCGAGTCAATCTATTATCAGGCGCTATTTTAGCCATTGGAAT AAGCTTAGCTGTAGATGGTTTCAAAAATCGCAACCTAAACCATAATATTTCTGTGATCATGGTTTAA
Upstream 100 bases:
>100_bases GAATAAAATTATAATTTTATTTAATTAAATATTGCAAATTAAACTTATATTTAAATATAATTTGTAATTAAATAATTATA AAAAATAAATGAGGTAATTA
Downstream 100 bases:
>100_bases TGAAAGGGGGCGATGCTTATTGCATTGGCTCCCTCAAAACTTATGGAGACTAGTTTGAATCTATTGTCTCATCTTAATGT AAAAATTTCAGCTCCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MFNRLPSDFPESLLKSGVITFAIDALIYGNAEQALAVSGTAVVATLISALTTPLFRKMFAAEQHATVTWYHSAVQIATSI ALSQVLINTFSHYRVNLLSGAILAIGISLAVDGFKNRNLNHNISVIMV
Sequences:
>Translated_128_residues MFNRLPSDFPESLLKSGVITFAIDALIYGNAEQALAVSGTAVVATLISALTTPLFRKMFAAEQHATVTWYHSAVQIATSI ALSQVLINTFSHYRVNLLSGAILAIGISLAVDGFKNRNLNHNISVIMV >Mature_128_residues MFNRLPSDFPESLLKSGVITFAIDALIYGNAEQALAVSGTAVVATLISALTTPLFRKMFAAEQHATVTWYHSAVQIATSI ALSQVLINTFSHYRVNLLSGAILAIGISLAVDGFKNRNLNHNISVIMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13776; Mature: 13776
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRLPSDFPESLLKSGVITFAIDALIYGNAEQALAVSGTAVVATLISALTTPLFRKMFA CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH AEQHATVTWYHSAVQIATSIALSQVLINTFSHYRVNLLSGAILAIGISLAVDGFKNRNLN HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HNISVIMV CCEEEEEC >Mature Secondary Structure MFNRLPSDFPESLLKSGVITFAIDALIYGNAEQALAVSGTAVVATLISALTTPLFRKMFA CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH AEQHATVTWYHSAVQIATSIALSQVLINTFSHYRVNLLSGAILAIGISLAVDGFKNRNLN HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC HNISVIMV CCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA