| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is aroL [H]
Identifier: 46446517
GI number: 46446517
Start: 1067824
End: 1068435
Strand: Direct
Name: aroL [H]
Synonym: pc0883
Alternate gene names: 46446517
Gene position: 1067824-1068435 (Clockwise)
Preceding gene: 46446516
Following gene: 46446518
Centisome position: 44.23
GC content: 34.8
Gene sequence:
>612_bases TTGCATCAAAAAGAGTTTTCCCAACTTTATTCAAGATTTAAAAAAACTTGGGGCTCGGTTTACATGATTTCTAAAAGAAG CGTTGCTTTGATTGGTCTACCTTTGTGTGGGAAAACAACATGGGGGCAATGGCTGGCTAAAAAATTTGAGTATGCCTTTA TTGATACAGACTGGCTAATTCAACAAAAACATCCTACGTTAACATGTCGAGAAATTTTTCAATTATTTGGGCAGTCCTAT TTCCGTTCTTTAGAAAGGGATGTCATTGATGACTTAAAGCCAACTAAACAGGTGATTATTGCAACCGGAGGTGGGGTGAT TTATAATGATCAAAATCGAAATGCGCTAAAAAAATATTGTCGGTTAATTTATTTGAAACTTTCTTTTTCAAACTGGAAAG AGCGTATTTTCAGTCAAACTGAGTTACCAGCCTATATTTCTCAAGAACAATCTTCGGATGTATCTTTGAAAAAACTCTAT GCAAGCAGAACGTTAATTTATGAAAATTGGGCAGACCAAACTATCGATATGAACGGATCTATGAACAACGATTTTTCTGT TCATCTACTCATGAGCCTTCAATTTGTTAAAGAGGAAAATAATGGCATCTAA
Upstream 100 bases:
>100_bases GAGGGGCTATTGTTGAGAGTTATGATGATCATCGTCTAGCAATGGCTTTAATCGTAGCTGGGCTGGCTAGCGAGGGCATT ACTGAAGTGAAAGGGATTGA
Downstream 100 bases:
>100_bases CAGTTTTGGTCATTTATTTAAAATGACGACTTGGGGGGAATCTCATGGAAAAGCGATGGGCGTTGTGATTGATGGCTGTC CCTCTGGAATTTTTCTAACT
Product: putative shikimate kinase precursor
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MHQKEFSQLYSRFKKTWGSVYMISKRSVALIGLPLCGKTTWGQWLAKKFEYAFIDTDWLIQQKHPTLTCREIFQLFGQSY FRSLERDVIDDLKPTKQVIIATGGGVIYNDQNRNALKKYCRLIYLKLSFSNWKERIFSQTELPAYISQEQSSDVSLKKLY ASRTLIYENWADQTIDMNGSMNNDFSVHLLMSLQFVKEENNGI
Sequences:
>Translated_203_residues MHQKEFSQLYSRFKKTWGSVYMISKRSVALIGLPLCGKTTWGQWLAKKFEYAFIDTDWLIQQKHPTLTCREIFQLFGQSY FRSLERDVIDDLKPTKQVIIATGGGVIYNDQNRNALKKYCRLIYLKLSFSNWKERIFSQTELPAYISQEQSSDVSLKKLY ASRTLIYENWADQTIDMNGSMNNDFSVHLLMSLQFVKEENNGI >Mature_203_residues MHQKEFSQLYSRFKKTWGSVYMISKRSVALIGLPLCGKTTWGQWLAKKFEYAFIDTDWLIQQKHPTLTCREIFQLFGQSY FRSLERDVIDDLKPTKQVIIATGGGVIYNDQNRNALKKYCRLIYLKLSFSNWKERIFSQTELPAYISQEQSSDVSLKKLY ASRTLIYENWADQTIDMNGSMNNDFSVHLLMSLQFVKEENNGI
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=174, Percent_Identity=29.3103448275862, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 23799; Mature: 23799
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQKEFSQLYSRFKKTWGSVYMISKRSVALIGLPLCGKTTWGQWLAKKFEYAFIDTDWLI CCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHCEEEECCHHEE QQKHPTLTCREIFQLFGQSYFRSLERDVIDDLKPTKQVIIATGGGVIYNDQNRNALKKYC ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCHHHHHHH RLIYLKLSFSNWKERIFSQTELPAYISQEQSSDVSLKKLYASRTLIYENWADQTIDMNGS HHEEEEECHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHEEECCCCCEEECCCC MNNDFSVHLLMSLQFVKEENNGI CCCCCEEEHHHHHHHHHHCCCCC >Mature Secondary Structure MHQKEFSQLYSRFKKTWGSVYMISKRSVALIGLPLCGKTTWGQWLAKKFEYAFIDTDWLI CCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHCEEEECCHHEE QQKHPTLTCREIFQLFGQSYFRSLERDVIDDLKPTKQVIIATGGGVIYNDQNRNALKKYC ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCHHHHHHH RLIYLKLSFSNWKERIFSQTELPAYISQEQSSDVSLKKLYASRTLIYENWADQTIDMNGS HHEEEEECHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHEEECCCCCEEECCCC MNNDFSVHLLMSLQFVKEENNGI CCCCCEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA