| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is aroA [H]
Identifier: 46446516
GI number: 46446516
Start: 1065071
End: 1067890
Strand: Direct
Name: aroA [H]
Synonym: pc0882
Alternate gene names: 46446516
Gene position: 1065071-1067890 (Clockwise)
Preceding gene: 46446515
Following gene: 46446517
Centisome position: 44.11
GC content: 37.34
Gene sequence:
>2820_bases TTGATTTTAATTGCATTGAATCTTATGGCACAAAAGCCCTCTTTTCATTCTTGTCAATTATGTGTCTCTTTAATTGATCT TACCTGCGATGCGTTTATCTATCAAATTCAACAACTTCCTTCGCAAGTGGACTTAATTGAAATTCGATTAGATAAGCTGT TAAAAATTGATTTTGCAGAATTAGATAGATTAAAAGAGATAGCTCATCGTCCTTTAATTTGGACACTTCGAAAAAAATCA CAAGGAGGAAATTTTTTAGGAAATATTCAAAAACAGTTTTTAATCTTTAAAGAGTTAGCTAAAAGACAGCCTGACTTTGT CGATATAGAAGCGGATATTCCTTTAGAATGGCTTCAAGAGCTTCAAAAAATTTCTCCTCAGACACAGTGGATTATTTCTT GGCACGAAGTGAAGGAGACACCTCATCTAAAAACCTGCTTAGATCAATTATATGCCTTGCCTGGAAATTATTATAAATTA GCTTGCTATACCCATTCTATCATTGATTCTCTCAAACTTCTTGAAATGGCTCAGCAAGAAAATAAACATTCGAGGCGCCT GTGTACAATCGGCCTCGGAATGAAGGGGCAGTGTACGCGAATTTTAGCTCCAGTAACGGGTCAACCATTTACATTTGCTT CTTTAAAAGAAGGCTTAGAATCTGCCCCTGGACAGATTTCATTTCAAACGCTTTTTCAAACTTATCGCTTTAAAAAACTT AGCCAGCAAACGGAAATTTTTGGTTTAATTGGACATCCAATCGATAAAAGTTTGAGTCATTTGACCCATAATGCTGTTTT AGATCATTTAAATCAGAATGCTGTTTATATTAAATTTGATGTCGAAGAGACAGAATTGGAATTGTTTTTTCAGCATATCC AACGTTTTTCTGTTCGTGGATTTAGCGTGACAATGCCTCATAAAGAACGAGTAAAAAAAATTCTTGCTTTGAATATGGAT GATGAGAGTCATTTAGCTTGTAACACTCTTTTGTTCAGCTCTTCAATAATTAACGGAACTAATACAGATGGAATCGGAGC TTTAAAAGCACTAAAAGTCGAAGACTTAAAAGATAAGAAATTGATTTTACTTGGAGCAGGAGGAACCTCCCAGGCAATTG CTTATGAAGCAAAAAAAAGAGGAGCGGAAGTTACGATTTTAAATCGCACAGTTTTACGTGCTAAAGATGTTGCTGAAAAG ATTCAGGTAAAGTGGGGAGGCTTTGAACAACTTAAAGAGGCTAAAAAAAATGAATGTGATATTCTAATTCAGACGACTTC TGTGGGGATGTCACCTCATGTGGATGCACTAGTTGTTTCGGCTGACTGGATTCCCCAACAAATTACTGCTTTAGACGTGA TTTCACACCCTTTCGAGACTCTTTTTTTGCAAAAAGCGCGTTTAAAAGGTTGCGAAATTCATCACGGGATCGAACTTTTT ATCCATCAAGCTGCCTTTCAATTTGGTTTTTGGTTTAATAAACAGTTCGATCAAAAACTTATTGAACAAACAATACGAGA GGCACTTCCAATGCCATTTAATCAAAAAAAAGTTGCTGTTCAAAAAAGCGCTTTAGCGGGAGAAATTTCTTTACCTCCCT CAAAGTCTCATTCAATTAGAGCTATTTTATTAGGGGCAATGACTCAAGGCATTTCACGTGTTAAAAATTTATTAGATTCT CCCGATGTGGAACATGCTAAGTTGGCGGCTATAGCATTAGGAGCTAAAATTGAACAGGTTCAAGATGAGTATTTAATTTC AGGTGTTGCTGGCCAACCTAAAACCCCTTCAGGGATAATTGATGTTGGAAATTCAGGTCAAGTTCTAAGATTTGCGGGGG CATTTGCAGCCTTAAATCATGGATATACTGTCATCACGGGCGATCATTCAATTTGTTCTAACCGTCCAGCACAACCACTT TTAGATGGGCTAAGATGTTTGGGAGCTTTTGCCAAATCAACAAGAGAGAATGGGTACGCCCCTTTAATTATCAAAGGACC TATTTATGAAGGAACAGCAGAATTAGAAGGACAGGATTCGCAACCCGTCTCCGCTCTATTGATGGCATCAGCATTTATTC ATGGCACAACAGAAATTTTCGTTAAATATCCAGGTGAAAAACCTTGGATTGACCTCACTCTTCACTGGTTGAACCGTCTA GGAGTTTCTTATATTAATCAAAACTATGAATACTTTAAGATTGAAGGCATTCAACAAAGACCTCATTTTGAGGTAAATAT TCCAGGCGATTTGAGTGCTGCCGCCTTTCCTGTAGCAGCAGCTATTTTAACTCAATCAAAAATCACTTTGTATAACGTTG ATATGAGTGATGTACAAGGAGATAAACAAGTAATCCATGTTCTCCAAGAAATGGGAGCTGATATTCAAATTGATCAGGCA AGTCACACGTTAACAGTTTTACCAGGGGCTTTATTGAAGGGAACAACTATCGACGTCAACCCCTTTATTGATGCTGTTCC TATTTTAGCTGTTCTTGCTTGTTTTGCAAAAGGGGAGACCCATTTAATCAATGCAGCAATTGCTCGACAAAAAGAAAGTA ATCGATTGAGCTGTATCACTATTGAGTTAAAAAAAATGGGGGCGCAAATTATGGAAACAGATGATGGGTTACTGATTCGT AACTCTAACTTGCGAGGGGCTATTGTTGAGAGTTATGATGATCATCGTCTAGCAATGGCTTTAATCGTAGCTGGGCTGGC TAGCGAGGGCATTACTGAAGTGAAAGGGATTGATTGCATCAAAAAGAGTTTTCCCAACTTTATTCAAGATTTAAAAAAAC TTGGGGCTCGGTTTACATGA
Upstream 100 bases:
>100_bases TCTCTTATTTACAGGCGAAAGTTGATTCAAAAATGCTGTAAAAAATAACAATTGAAAACTTAACCCTGAGATAAGTATTC TAGCAGTTAAGTAATTTTTA
Downstream 100 bases:
>100_bases TTTCTAAAAGAAGCGTTGCTTTGATTGGTCTACCTTTGTGTGGGAAAACAACATGGGGGCAATGGCTGGCTAAAAAATTT GAGTATGCCTTTATTGATAC
Product: putative 3-phosphoshikimate 1-carboxyvinyltransferase(5-enolpyruvylshikimate-3- phosphat e synthase, EPSP synthase)
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 939; Mature: 939
Protein sequence:
>939_residues MILIALNLMAQKPSFHSCQLCVSLIDLTCDAFIYQIQQLPSQVDLIEIRLDKLLKIDFAELDRLKEIAHRPLIWTLRKKS QGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWLQELQKISPQTQWIISWHEVKETPHLKTCLDQLYALPGNYYKL ACYTHSIIDSLKLLEMAQQENKHSRRLCTIGLGMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKL SQQTEIFGLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRGFSVTMPHKERVKKILALNMD DESHLACNTLLFSSSIINGTNTDGIGALKALKVEDLKDKKLILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEK IQVKWGGFEQLKEAKKNECDILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLFLQKARLKGCEIHHGIELF IHQAAFQFGFWFNKQFDQKLIEQTIREALPMPFNQKKVAVQKSALAGEISLPPSKSHSIRAILLGAMTQGISRVKNLLDS PDVEHAKLAAIALGAKIEQVQDEYLISGVAGQPKTPSGIIDVGNSGQVLRFAGAFAALNHGYTVITGDHSICSNRPAQPL LDGLRCLGAFAKSTRENGYAPLIIKGPIYEGTAELEGQDSQPVSALLMASAFIHGTTEIFVKYPGEKPWIDLTLHWLNRL GVSYINQNYEYFKIEGIQQRPHFEVNIPGDLSAAAFPVAAAILTQSKITLYNVDMSDVQGDKQVIHVLQEMGADIQIDQA SHTLTVLPGALLKGTTIDVNPFIDAVPILAVLACFAKGETHLINAAIARQKESNRLSCITIELKKMGAQIMETDDGLLIR NSNLRGAIVESYDDHRLAMALIVAGLASEGITEVKGIDCIKKSFPNFIQDLKKLGARFT
Sequences:
>Translated_939_residues MILIALNLMAQKPSFHSCQLCVSLIDLTCDAFIYQIQQLPSQVDLIEIRLDKLLKIDFAELDRLKEIAHRPLIWTLRKKS QGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWLQELQKISPQTQWIISWHEVKETPHLKTCLDQLYALPGNYYKL ACYTHSIIDSLKLLEMAQQENKHSRRLCTIGLGMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKL SQQTEIFGLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRGFSVTMPHKERVKKILALNMD DESHLACNTLLFSSSIINGTNTDGIGALKALKVEDLKDKKLILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEK IQVKWGGFEQLKEAKKNECDILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLFLQKARLKGCEIHHGIELF IHQAAFQFGFWFNKQFDQKLIEQTIREALPMPFNQKKVAVQKSALAGEISLPPSKSHSIRAILLGAMTQGISRVKNLLDS PDVEHAKLAAIALGAKIEQVQDEYLISGVAGQPKTPSGIIDVGNSGQVLRFAGAFAALNHGYTVITGDHSICSNRPAQPL LDGLRCLGAFAKSTRENGYAPLIIKGPIYEGTAELEGQDSQPVSALLMASAFIHGTTEIFVKYPGEKPWIDLTLHWLNRL GVSYINQNYEYFKIEGIQQRPHFEVNIPGDLSAAAFPVAAAILTQSKITLYNVDMSDVQGDKQVIHVLQEMGADIQIDQA SHTLTVLPGALLKGTTIDVNPFIDAVPILAVLACFAKGETHLINAAIARQKESNRLSCITIELKKMGAQIMETDDGLLIR NSNLRGAIVESYDDHRLAMALIVAGLASEGITEVKGIDCIKKSFPNFIQDLKKLGARFT >Mature_939_residues MILIALNLMAQKPSFHSCQLCVSLIDLTCDAFIYQIQQLPSQVDLIEIRLDKLLKIDFAELDRLKEIAHRPLIWTLRKKS QGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWLQELQKISPQTQWIISWHEVKETPHLKTCLDQLYALPGNYYKL ACYTHSIIDSLKLLEMAQQENKHSRRLCTIGLGMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKL SQQTEIFGLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRGFSVTMPHKERVKKILALNMD DESHLACNTLLFSSSIINGTNTDGIGALKALKVEDLKDKKLILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEK IQVKWGGFEQLKEAKKNECDILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLFLQKARLKGCEIHHGIELF IHQAAFQFGFWFNKQFDQKLIEQTIREALPMPFNQKKVAVQKSALAGEISLPPSKSHSIRAILLGAMTQGISRVKNLLDS PDVEHAKLAAIALGAKIEQVQDEYLISGVAGQPKTPSGIIDVGNSGQVLRFAGAFAALNHGYTVITGDHSICSNRPAQPL LDGLRCLGAFAKSTRENGYAPLIIKGPIYEGTAELEGQDSQPVSALLMASAFIHGTTEIFVKYPGEKPWIDLTLHWLNRL GVSYINQNYEYFKIEGIQQRPHFEVNIPGDLSAAAFPVAAAILTQSKITLYNVDMSDVQGDKQVIHVLQEMGADIQIDQA SHTLTVLPGALLKGTTIDVNPFIDAVPILAVLACFAKGETHLINAAIARQKESNRLSCITIELKKMGAQIMETDDGLLIR NSNLRGAIVESYDDHRLAMALIVAGLASEGITEVKGIDCIKKSFPNFIQDLKKLGARFT
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=418, Percent_Identity=33.0143540669856, Blast_Score=167, Evalue=3e-42, Organism=Escherichia coli, GI1787983, Length=287, Percent_Identity=28.2229965156794, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI1789675, Length=278, Percent_Identity=28.4172661870504, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320332, Length=485, Percent_Identity=29.2783505154639, Blast_Score=136, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 104280; Mature: 104280
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIALNLMAQKPSFHSCQLCVSLIDLTCDAFIYQIQQLPSQVDLIEIRLDKLLKIDFAE CEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHHHHHCCHHH LDRLKEIAHRPLIWTLRKKSQGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWLQE HHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH LQKISPQTQWIISWHEVKETPHLKTCLDQLYALPGNYYKLACYTHSIIDSLKLLEMAQQE HHHCCCCCEEEEEHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHH NKHSRRLCTIGLGMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKL CCCCCEEEEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHH SQQTEIFGLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRG HHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC FSVTMPHKERVKKILALNMDDESHLACNTLLFSSSIINGTNTDGIGALKALKVEDLKDKK EEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCCCE LILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEKIQVKWGGFEQLKEAKKNECD EEEEECCCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHEECCCCHHHHHHCCCCCCE ILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLFLQKARLKGCEIHHGIELF EEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCHHHHH IHQAAFQFGFWFNKQFDQKLIEQTIREALPMPFNQKKVAVQKSALAGEISLPPSKSHSIR HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHH AILLGAMTQGISRVKNLLDSPDVEHAKLAAIALGAKIEQVQDEYLISGVAGQPKTPSGII HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEE DVGNSGQVLRFAGAFAALNHGYTVITGDHSICSNRPAQPLLDGLRCLGAFAKSTRENGYA EECCCCCEEEEHHHHHHHCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC PLIIKGPIYEGTAELEGQDSQPVSALLMASAFIHGTTEIFVKYPGEKPWIDLTLHWLNRL EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHH GVSYINQNYEYFKIEGIQQRPHFEVNIPGDLSAAAFPVAAAILTQSKITLYNVDMSDVQG HHHHHCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCC DKQVIHVLQEMGADIQIDQASHTLTVLPGALLKGTTIDVNPFIDAVPILAVLACFAKGET HHHHHHHHHHCCCCEEEECCCCEEEEECCHHHCCCEEECCHHHHHHHHHHHHHHHHCCCH HLINAAIARQKESNRLSCITIELKKMGAQIMETDDGLLIRNSNLRGAIVESYDDHRLAMA HEEHHHHHHCCCCCCEEEEEEEHHHCCCHHEECCCCEEEECCCCCEEEECCCCCHHHHHH LIVAGLASEGITEVKGIDCIKKSFPNFIQDLKKLGARFT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MILIALNLMAQKPSFHSCQLCVSLIDLTCDAFIYQIQQLPSQVDLIEIRLDKLLKIDFAE CEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHHHHHCCHHH LDRLKEIAHRPLIWTLRKKSQGGNFLGNIQKQFLIFKELAKRQPDFVDIEADIPLEWLQE HHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH LQKISPQTQWIISWHEVKETPHLKTCLDQLYALPGNYYKLACYTHSIIDSLKLLEMAQQE HHHCCCCCEEEEEHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHH NKHSRRLCTIGLGMKGQCTRILAPVTGQPFTFASLKEGLESAPGQISFQTLFQTYRFKKL CCCCCEEEEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHCCCCCEEHHHHHHHHHHHHH SQQTEIFGLIGHPIDKSLSHLTHNAVLDHLNQNAVYIKFDVEETELELFFQHIQRFSVRG HHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCC FSVTMPHKERVKKILALNMDDESHLACNTLLFSSSIINGTNTDGIGALKALKVEDLKDKK EEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCCCE LILLGAGGTSQAIAYEAKKRGAEVTILNRTVLRAKDVAEKIQVKWGGFEQLKEAKKNECD EEEEECCCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHEECCCCHHHHHHCCCCCCE ILIQTTSVGMSPHVDALVVSADWIPQQITALDVISHPFETLFLQKARLKGCEIHHGIELF EEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCHHHHH IHQAAFQFGFWFNKQFDQKLIEQTIREALPMPFNQKKVAVQKSALAGEISLPPSKSHSIR HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHH AILLGAMTQGISRVKNLLDSPDVEHAKLAAIALGAKIEQVQDEYLISGVAGQPKTPSGII HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEE DVGNSGQVLRFAGAFAALNHGYTVITGDHSICSNRPAQPLLDGLRCLGAFAKSTRENGYA EECCCCCEEEEHHHHHHHCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC PLIIKGPIYEGTAELEGQDSQPVSALLMASAFIHGTTEIFVKYPGEKPWIDLTLHWLNRL EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHH GVSYINQNYEYFKIEGIQQRPHFEVNIPGDLSAAAFPVAAAILTQSKITLYNVDMSDVQG HHHHHCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCC DKQVIHVLQEMGADIQIDQASHTLTVLPGALLKGTTIDVNPFIDAVPILAVLACFAKGET HHHHHHHHHHCCCCEEEECCCCEEEEECCHHHCCCEEECCHHHHHHHHHHHHHHHHCCCH HLINAAIARQKESNRLSCITIELKKMGAQIMETDDGLLIRNSNLRGAIVESYDDHRLAMA HEEHHHHHHCCCCCCEEEEEEEHHHCCCHHEECCCCEEEECCCCCEEEECCCCCHHHHHH LIVAGLASEGITEVKGIDCIKKSFPNFIQDLKKLGARFT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA