Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446492

Identifier: 46446492

GI number: 46446492

Start: 1039402

End: 1039812

Strand: Direct

Name: 46446492

Synonym: pc0858

Alternate gene names: NA

Gene position: 1039402-1039812 (Clockwise)

Preceding gene: 46446491

Following gene: 46446494

Centisome position: 43.05

GC content: 39.42

Gene sequence:

>411_bases
TTGATAGCATTTGCATGTGTGGAGATTGATCACAAGTTCTATGTTAGCTCCATTGGTGTCCATAAAAGACGCGATGGCGC
TGGTTATAGAATCACCTATCCCACTCGGAAAGTTGGAGAACAAAATTTAACTATTTTCCATCCAACCCAAGCATCACTCA
GCAAAGAAATTGAGAGAGTCATTGACAAGGTTAGAGATTATAAAGCTCGCCAAGCTGAAATCGTTGAGCAGATGGCACGC
CATGAGAAAGCAAATCAAAACTTTTATATCACTGCCAACATGGTAATGAACCTGACCGCTCGTGCTAGGGAGATTTTCGA
AAGTTCTGAAGTCGATGAAAAACGCCAACTTTTGAATTTTGTGTTTCAGAACTTAAAATTAGACGGTAAAAATCTATCTA
GATACTTGTGA

Upstream 100 bases:

>100_bases
AGCTTTTTTGATCTGCTTCTTCAAATAGACAGACGTAATCATTCGGAGTTTTATGAGCATAACCAAAGTGGAACTTCTTC
CCATCAGGCCACAGAAAGGC

Downstream 100 bases:

>100_bases
ACTATTTACTACCTTAGTGGGCTATAAGAAATGCCAGAAAGGATGGGGGCGGTTGGACTCGAACCAACGGAGACCGAAGT
CGAGGGATTTACAGTCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIAFACVEIDHKFYVSSIGVHKRRDGAGYRITYPTRKVGEQNLTIFHPTQASLSKEIERVIDKVRDYKARQAEIVEQMAR
HEKANQNFYITANMVMNLTARAREIFESSEVDEKRQLLNFVFQNLKLDGKNLSRYL

Sequences:

>Translated_136_residues
MIAFACVEIDHKFYVSSIGVHKRRDGAGYRITYPTRKVGEQNLTIFHPTQASLSKEIERVIDKVRDYKARQAEIVEQMAR
HEKANQNFYITANMVMNLTARAREIFESSEVDEKRQLLNFVFQNLKLDGKNLSRYL
>Mature_136_residues
MIAFACVEIDHKFYVSSIGVHKRRDGAGYRITYPTRKVGEQNLTIFHPTQASLSKEIERVIDKVRDYKARQAEIVEQMAR
HEKANQNFYITANMVMNLTARAREIFESSEVDEKRQLLNFVFQNLKLDGKNLSRYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15899; Mature: 15899

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFACVEIDHKFYVSSIGVHKRRDGAGYRITYPTRKVGEQNLTIFHPTQASLSKEIERV
CEEEEEEEECCHHHHHHCCCCCCCCCCCEEEECCHHHCCCCCCEEECCCHHHHHHHHHHH
IDKVRDYKARQAEIVEQMARHEKANQNFYITANMVMNLTARAREIFESSEVDEKRQLLNF
HHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VFQNLKLDGKNLSRYL
HHHHCCCCCCHHHCCC
>Mature Secondary Structure
MIAFACVEIDHKFYVSSIGVHKRRDGAGYRITYPTRKVGEQNLTIFHPTQASLSKEIERV
CEEEEEEEECCHHHHHHCCCCCCCCCCCEEEECCHHHCCCCCCEEECCCHHHHHHHHHHH
IDKVRDYKARQAEIVEQMARHEKANQNFYITANMVMNLTARAREIFESSEVDEKRQLLNF
HHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VFQNLKLDGKNLSRYL
HHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA